RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PRKACAP17612 351 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CX3CR1P49238 355 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 EPHA4P54764 986 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 TMIEQ8NEW7 156 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 FAM174AQ8TBP5 190 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 DTD2Q96FN9 168 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 TMEM45AQ9NWC5 275 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ARID1BQ8NFD5 2236 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 FGF4P08620 206 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CCR6P51684 374 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CTBSQ01459 385 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 BAIAP2L2Q6UXY1 529 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 KLHL13Q9P2N7 655 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 A0A0J9YY10 115 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 H0Y8G0 127 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF623O75123 536 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 SHC1P29353 583 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 APLNRP35414 380 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ALDH3B2P48448 385 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF322Q6U7Q0 402 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF534Q76KX8 674 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 FGF13Q92913 245 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 LPAR4Q99677 370 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 NIPSNAP1Q9BPW8 284 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CLEC2DQ9UHP7 191 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 TCRBV3S1A0A5B6 114 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 C7P10643 843 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CXADRP78310 365 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 SFRP5Q5T4F7 317 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ANKRD34AQ69YU3 496 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 MEPCEQ7L2J0 689 aaKnown RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 PRICKLE2Q7Z3G6 844 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 SPTSSAQ969W0 71 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 MAP3K3Q99759 626 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 DHRS4Q9BTZ2 278 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 METTL17Q9H7H0 456 aaPredicted RBP12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CDH20Q9HBT6 801 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF28P17035 718 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 CLDN6P56747 220 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 NRARPQ7Z6K4 114 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 METTL4Q8N3J2 472 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 TMEM163Q8TC26 289 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 OR5M11Q96RB7 305 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 NUBP2Q9Y5Y2 271 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 STK17BO94768 372 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 HLA-AP01891 365 aaKnown RBP12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 PAQR9Q6ZVX9 377 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 NTNG1Q9Y2I2 539 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 V9GY05 133 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 CBX7O95931 251 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 IGFBP1P08833 259 aaPredicted RBP12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 MAKP20794 623 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 HOXD12P35452 270 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 PIGAP37287 484 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 TAP2Q03519 686 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF33BQ06732 778 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 MORN1Q5T089 497 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 SGPP2Q8IWX5 399 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 GPR150Q8NGU9 434 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 ATOH8Q96SQ7 321 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 HSPE1-MOB4S4R3N1 261 aa12.71□□□□□ -0.37
TGFBR3-201ENST00000212355 ARHGAP33O14559 1287 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 TUSC2O75896 110 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 TUBB3Q13509 450 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 GPR148Q8TDV2 347 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 DNAJB11Q9UBS4 358 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 CBLCQ9ULV8 474 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 LRRTM2O43300 516 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 PMP2P02689 132 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 SDHBP21912 280 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 PRKACBP22694 351 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 AOAHP28039 575 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 HOXD9P28356 352 aaPredicted RBP12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 ACTBP60709 375 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 ACTG1P63261 375 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 AGAP7PQ5VUJ5 663 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 AGAP6Q5VW22 663 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 HEPHL1Q6MZM0 1159 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 LCTLQ6UWM7 567 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 AVL9Q8NBF6 648 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 PFN4Q8NHR9 129 aa12.71□□□□□ -0.38
TGFBR3-201ENST00000212355 AGAP4Q96P64 663 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms