RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 H7BY64 318 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 HTR3BO95264 441 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 TGM1P22735 817 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CLDN6P56747 220 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ISL1P61371 349 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 GPLD1P80108 840 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 FAM180BQ6P0A1 224 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 MAMDC4Q6UXC1 1216 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ASPGQ86U10 573 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 LSMEM2Q8N112 164 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ISL2Q96A47 359 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 DNAJA3Q96EY1 480 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 PRAP1Q96NZ9 151 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SPIN2AQ99865 258 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SPIN2BQ9BPZ2 258 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 NIPSNAP3BQ9BS92 247 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SYT11Q9BT88 431 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 TMEM231Q9H6L2 316 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SERTAD4Q9NUC0 356 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SLC23A1Q9UHI7 598 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 NUMBLQ9Y6R0 609 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 LRRC37A3O60309 1634 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CNOT4O95628 575 aaKnown RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 APBB3O95704 486 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 GIPP09681 153 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 EPHA1P21709 976 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 HOXC8P31273 242 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 MEOX2P50222 304 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 HYAL2Q12891 473 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 LMAN2Q12907 356 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 AQP6Q13520 282 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CTU2Q2VPK5 515 aaKnown RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 DPPA4Q7L190 304 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 TCTE3Q8IZS6 198 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 RELL2Q8NC24 303 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 C16orf78Q8WTQ4 265 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 UBE2FQ969M7 185 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SLC6A17Q9H1V8 727 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 LDAHQ9H6V9 325 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 HRASLS2Q9NWW9 162 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ASB6Q9NWX5 421 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 MAN2B1O00754 1011 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GASTP01350 101 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 IFNGR1P15260 489 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 KCNJ5P48544 419 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 RAP1AP62834 184 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GAB1Q13480 694 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 IER5LQ5T953 404 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 BTLAQ7Z6A9 289 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ACVR1CQ8NER5 493 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CHTF18Q8WVB6 975 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ZNF583Q96ND8 569 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GMLQ99445 158 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ARNT2Q9HBZ2 717 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CYB5R1Q9UHQ9 305 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ICKQ9UPZ9 632 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GAB2Q9UQC2 676 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 DVL2O14641 736 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 EGFP01133 1207 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SDC1P18827 310 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CD68P34810 354 aaPredicted RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 MTNR1BP49286 362 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 HEPHL1Q6MZM0 1159 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SLC18B1Q6NT16 456 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 MFSD6LQ8IWD5 586 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SLC38A6Q8IZM9 456 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GATSQ8NAP1 163 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 LGALS14Q8TCE9 139 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SFXN5Q8TD22 340 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 NINJ1Q92982 152 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 PCYT2Q99447 389 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 TOLLIPQ9H0E2 274 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SUSD2Q9UGT4 822 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SLC7A7Q9UM01 511 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 TUBAL3A6NHL2 446 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 FAM183AA6NL82 134 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GPR37L1O60883 481 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 TRAPPC6AO75865 159 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GLAP06280 429 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 NQO2P16083 231 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 RPE65Q16518 533 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 PODNL1Q6PEZ8 512 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 MEX3BQ6ZN04 569 aaKnown RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 OR4D10Q8NGI6 311 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 OR2T4Q8NH00 348 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 RSC1A1Q92681 617 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SLC25A46Q96AG3 418 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GPR78Q96P69 363 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 F2RL3Q96RI0 385 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ZIC5Q96T25 663 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ALOXE3Q9BYJ1 711 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ZNF442Q9H7R0 627 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 AKAP12Q02952 1782 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 PHOX2AO14813 284 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 MPIG6BO95866 241 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CSTAP01040 98 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms