RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 COX6A1P12074 109 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 IFI30P13284 250 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 EVI2BP34910 448 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TGFBR2P37173 567 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 FOLR3P41439 243 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 STAT5AP42229 794 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 RANBP1P43487 201 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ST13P50502 369 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TEKQ02763 1124 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ZNF117Q03924 483 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 EIF3IQ13347 325 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GINS1Q14691 196 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 STPG1Q5TH74 334 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 UBE2UQ5VVX9 321 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ACSM5Q6NUN0 579 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 C6orf15Q6UXA7 325 aaPredicted RBP18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CASP12Q6UXS9 341 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ZNF620Q6ZNG0 422 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GLRX5Q86SX6 157 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MARCH3Q86UD3 253 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 P2RY8Q86VZ1 359 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TMCO5AQ8N6Q1 288 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 WDR36Q8NI36 951 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TEX47Q8TBZ9 253 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ELP5Q8TE02 316 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 C3orf49Q96BT1 292 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TBL1XR1Q9BZK7 514 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MYOTQ9UBF9 498 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PCDHGA3Q9Y5H0 932 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 DOCK10Q96BY6 2186 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ASPMQ8IZT6 3477 aa18■□□□□ 0.47
TNFRSF1A-201ENST00000162749 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NDUFB5O43674 189 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ZFAND5O76080 213 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MAKP20794 623 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 RBM34P42696 430 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 LSM3P62310 102 aaKnown RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 BTBD16Q32M84 506 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NDNFQ8TB73 568 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 DNAJA4Q8WW22 397 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 BPIFA2Q96DR5 249 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SH3YL1Q96HL8 342 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 IL4I1Q96RQ9 567 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 KLHDC3Q9BQ90 382 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 LRFN3Q9BTN0 628 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 COL25A1Q9BXS0 654 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CLCA1A8K7I4 914 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MAGEB3O15480 346 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NADKO95544 446 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 FUT1P19526 365 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 MST1P26927 711 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NUDT6P53370 316 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CTBP2P56545 445 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 VBP1P61758 197 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 C3orf38Q5JPI3 329 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SLC27A4Q6P1M0 643 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TMPRSS11FQ6ZWK6 438 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PLEKHA8Q96JA3 519 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 IMMP1LQ96LU5 166 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 LAT2Q9GZY6 243 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ZNF700Q9H0M5 742 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SLC25A19Q9HC21 320 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 FOXJ2Q9P0K8 574 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CPAMD8Q8IZJ3 1885 aa17.99■□□□□ 0.47
TNFRSF1A-201ENST00000162749 J3QRK9 145 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SLC22A1O15245 554 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 HCRTR2O43614 444 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TCN2P20062 427 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SMSP52788 366 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 FBXW4P57775 412 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CLEC12AQ5QGZ9 265 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 WBP2NLQ6ICG8 309 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OR8J1Q8NGP2 316 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OR5M3Q8NGP4 307 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TRUB1Q8WWH5 349 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ZNF524Q96C55 264 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 PRRX2Q99811 253 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 A0A087WUJ7 227 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ADAM10O14672 748 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CDK1P06493 297 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 RPS18P62269 152 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SNRPGP62308 76 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CT55Q8WUE5 264 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 RPL3LQ92901 407 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 DEFB126Q9BYW3 111 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GPR83Q9NYM4 423 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TVP23BQ9NYZ1 205 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TCFL5Q9UL49 500 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 ICAM5Q9UMF0 924 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 TMEM5Q9Y2B1 443 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CDH10Q9Y6N8 788 aa17.98■□□□□ 0.47
TNFRSF1A-201ENST00000162749 M0R082 166 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 GNB5O14775 395 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 SCO2O43819 266 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 CD63P08962 238 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 LIPAP38571 399 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 FXYD6P3P58550 94 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 NCS1P62166 190 aa17.97■□□□□ 0.47
TNFRSF1A-201ENST00000162749 EFR3AQ14156 821 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms