RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 HOXB2P14652 356 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TGM1P22735 817 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TNFSF9P41273 254 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 OR4D2P58180 307 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ENDOGQ14249 297 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC41A2Q96JW4 573 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PCDHAC1Q9H158 963 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 DNAJC27Q9NZQ0 273 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 EVLQ9UI08 416 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ARRDC5A6NEK1 342 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ARPC5O15511 151 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PRKACAP17612 351 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CR2P20023 1033 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 KIR2DL3P43628 341 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 FLI1Q01543 452 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PHF19Q5T6S3 580 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 POMZP3Q6PJE2 187 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TMPRSS7Q7RTY8 843 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC25A32Q9H2D1 315 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 HRH4Q9H3N8 390 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RNF19AQ9NV58 838 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CD300AQ9UGN4 299 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RBMX2Q9Y388 322 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PCDHGC4Q9Y5F7 938 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GLOD5A6NK44 160 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 NIPSNAP2O75323 286 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ABHD16AO95870 558 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 FCGR2AP12318 317 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SOX18P35713 384 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ADPRHP54922 357 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 FGFBP1Q14512 234 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 UBXN2BQ14CS0 331 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MRPL21Q7Z2W9 205 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TECPR1Q7Z6L1 1165 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF485Q8NCK3 441 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CSNK2A3Q8NEV1 391 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TFAP2CQ92754 450 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PDLIM5Q96HC4 596 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ARPC5LQ9BPX5 153 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 STRAPQ9Y3F4 350 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 V9GY05 133 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC31A2O15432 143 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CSN1S1P47710 185 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SCAND1P57086 179 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC36A2Q495M3 483 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF628Q5EBL2 1059 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 GPR157Q5UAW9 335 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC2A7Q6PXP3 512 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MTURNQ8N3F0 131 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 OR51T1Q8NGJ9 327 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 OR51Q1Q8NH59 317 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MIB2Q96AX9 1013 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 KAZALD1Q96I82 304 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ATF6BQ99941 703 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 NSUN3Q9H649 340 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RPH3AQ9Y2J0 694 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TRPM7Q96QT4 1865 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 A0A1B0GTW7 788 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 OPRD1P41143 372 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC1A3P43003 542 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 WDR4P57081 412 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 NSDHLQ15738 373 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 POGLUT1Q8NBL1 392 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CLEC1AQ8NC01 280 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ACVR1CQ8NER5 493 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 DBF4BQ8NFT6 615 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 C16orf78Q8WTQ4 265 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 C7orf34Q96L11 122 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PLEKHA2Q9HB19 425 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TUBG2Q9NRH3 451 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF586Q9NXT0 402 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MMACHCQ9Y4U1 282 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 NPIPB15A6NHN6 443 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 VAMP5O95183 116 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PRDX3P30048 256 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CSKP41240 450 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RPS23P62266 143 aaKnown RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 BAMBIQ13145 260 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 RUNX2Q13950 521 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CNIH2Q6PI25 160 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 DPPA2Q7Z7J5 298 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 MKXQ8IYA7 352 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CASTOR1Q8WTX7 329 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC25A43Q8WUT9 341 aaPredicted RBP5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PSMF1Q92530 271 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CCDC120Q96HB5 630 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SARDHQ9UL12 918 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 EPHB6O15197 1021 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CLEC3BP05452 202 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 AGTR2P50052 363 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 P2RX1P51575 399 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 PLPP4Q5VZY2 271 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CD276Q5ZPR3 534 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 EEF1DP3Q658K8 133 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 CPZQ66K79 652 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 HSPBAP1Q96EW2 488 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 TMPRSS5Q9H3S3 457 aa5.72□□□□□ -1.49
VPS13D-201ENST00000011700 SLC23A1Q9UHI7 598 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms