RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TPRA1Q86W33 373 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC44A3Q8N4M1 653 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 OR7G2Q8NG99 324 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 SMPDL3BQ92485 455 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 LRRC3BQ96PB8 259 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 LRRN3Q9H3W5 708 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 CES1P1Q9UKY3 287 aa9.75□□□□□ -0.85
CX3CL1-201ENST00000006053 TRABD2BA6NFA1 517 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 NDUFS6O75380 124 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 UBL3O95164 117 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 HOXD4P09016 255 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PEPDP12955 493 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PPM1AP35813 382 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RAB28P51157 221 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 GRK1Q15835 563 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 AANATQ16613 207 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 HNRNPA1L2Q32P51 320 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 MRM1Q6IN84 353 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 MTSS1LQ765P7 747 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ARL14Q8N4G2 192 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 OR2L5Q8NG80 312 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 OR51L1Q8NGJ5 315 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 TMEM239Q8WW34 195 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PITHD1Q9GZP4 211 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SYNPO2LQ9H987 977 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 APOBEC3BQ9UH17 382 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PLEKHM1Q9Y4G2 1056 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 KIAA1549LQ6ZVL6 1849 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC22A31A6NKX4 558 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 BHLHE40O14503 412 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 GLAP06280 429 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ASGR2P07307 311 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SBK2P0C263 348 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SELENOPP49908 381 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 HSD17B7P56937 341 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SHC2P98077 582 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ID2Q02363 134 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 CRMP1Q14194 572 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RTL4Q6ZR62 310 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 LINGO2Q7L985 606 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SSX6Q7RTT6 188 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 GRASPQ7Z6J2 395 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RANBP3LQ86VV4 465 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 GPALPP1Q8IXQ4 340 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RFLNBQ8N5W9 214 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 INTS12Q96CB8 462 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ORAI1Q96D31 301 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 COX14Q96I36 57 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 TMEM168Q9H0V1 697 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 OR10A4Q9H209 315 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 MTHFD2LQ9H903 347 aaPredicted RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC6A20Q9NP91 592 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 COPS3Q9UNS2 423 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 MEIKINA0A087WXM9 373 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RPS10-NUDT3A0A1W2PQS6 291 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PTP4A3O75365 173 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 LCN1P31025 176 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 P2RY2P41231 377 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 TSPAN5P62079 268 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PITPNAQ00169 270 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ZNF85Q03923 595 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ELAVL3Q14576 367 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ZIC1Q15915 447 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 BTN2A1Q7KYR7 527 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 KANSL1Q7Z3B3 1105 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 TMIEQ8NEW7 156 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 BRIX1Q8TDN6 353 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 GRHL3Q8TE85 626 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 HMGB4Q8WW32 186 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 THAP4Q8WY91 577 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PEX11GQ96HA9 241 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 HHIPL1Q96JK4 782 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RBP7Q96R05 134 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 PRSS27Q9BQR3 290 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 C1QTNF6Q9BXI9 259 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 CCDC86Q9H6F5 360 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 CAPN10Q9HC96 672 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 ADAP2Q9NPF8 381 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 RDH8Q9NYR8 311 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 USP36Q9P275 1121 aaKnown RBP9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 COPZ2Q9P299 210 aa9.74□□□□□ -0.85
CX3CL1-201ENST00000006053 SCN2AQ99250 2005 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 F5P12259 2224 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 A0A1B0GVI7 797 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 TRAPPC13A5PLN9 417 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 DUXAA6NLW8 204 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 RIIAD1A6NNX1 92 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 M0R233 179 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 FLRT2O43155 660 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 PPP1R3DO95685 299 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 SULT1A3P0DMM9 295 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 SULT1A4P0DMN0 295 aa9.73□□□□□ -0.85
CX3CL1-201ENST00000006053 DDX6P26196 483 aaKnown RBP eCLIP9.73□□□□□ -0.855e-6■■■■□ 21.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms