RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 ELMOD2Q8IZ81 293 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 METTL27Q8N6F8 245 aaPredicted RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 ZNF527Q8NB42 609 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 OR10AC1Q8NH08 325 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 FAM3CQ92520 227 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 RGP1Q92546 391 aaPredicted RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 A0A1B0GVT2 93 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 H7C1C5 153 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 CA3P07451 260 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 SMIM11AP58511 58 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 LCN6P62502 163 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 DECR1Q16698 335 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 LGALSLQ3ZCW2 172 aaPredicted RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 FCRL6Q6DN72 434 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 KIAA1324Q6UXG2 1013 aaKnown RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 MEPCEQ7L2J0 689 aaKnown RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 PAQR7Q86WK9 346 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 CA10Q9NS85 328 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 THAP10Q9P2Z0 257 aaPredicted RBP9.86□□□□□ -0.83
USP28-201ENST00000003302 SLC13A4Q9UKG4 626 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 PCDHGB7Q9Y5F8 929 aa9.86□□□□□ -0.83
USP28-201ENST00000003302 SGK494L7N484 410 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 GSTM3P21266 225 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ACSL1P33121 698 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 GNG2P59768 71 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 CEBPEQ15744 281 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 GLRX5Q86SX6 157 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 CEP76Q8TAP6 659 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 RASD2Q96D21 266 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ZC3HAV1LQ96H79 300 aaKnown RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 DMRTA2Q96SC8 542 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 NMNAT3Q96T66 252 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 MCCC2Q9HCC0 563 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ASB6Q9NWX5 421 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 PRKAG2Q9UGJ0 569 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 RAD1O60671 282 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 PRKAR1AP10644 381 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 SLC2A5P22732 501 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 AHCYP23526 432 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 PBX2P40425 430 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 GNA13Q14344 377 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 NDUFA9Q16795 377 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 DCST2Q5T1A1 773 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 BIVMQ86UB2 503 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 OR2L13Q8N349 312 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ZNF784Q8NCA9 323 aaPredicted RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 OR52E2Q8NGJ4 325 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 OR51A4Q8NGJ6 313 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 LCN9Q8WX39 176 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 SMPDL3BQ92485 455 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 OSTF1Q92882 214 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 KLF15Q9UIH9 416 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ST6GALNAC2Q9UJ37 374 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ADAM29Q9UKF5 820 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 DAPP1Q9UN19 280 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ZNF780BQ9Y6R6 833 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3DA0A087WVF3 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3IA0A087WXS9 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3EA0A087X179 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3KA0A087X1G2 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3FA6NER0 549 aaPredicted RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3LB9A6J9 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 RGS9O75916 674 aaPredicted RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3HP0C7X1 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 PRKAR1BP31321 381 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 GABRA3P34903 492 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ADPRHP54922 357 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 MAT1AQ00266 395 aaKnown RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 SF3A2Q15428 464 aaKnown RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 C2orf68Q2NKX9 166 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TOR2AQ5JU69 321 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 FHL5Q5TD97 284 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3GQ6DHY5 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3CQ6IPX1 549 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TBC1D3Q8IZP1 549 aaPredicted RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 LRRC25Q8N386 305 aaPredicted RBP9.85□□□□□ -0.83
USP28-201ENST00000003302 PPP1R14AQ96A00 147 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 HDAC8Q9BY41 377 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 CHIAQ9BZP6 476 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 KLHDC2Q9Y2U9 406 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 UNC119BA6NIH7 251 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 TMEM240Q5SV17 173 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 HBMQ6B0K9 141 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 ENPP7Q6UWV6 458 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 OR56A1Q8NGH5 318 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 OR52N1Q8NH53 320 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 LGALS14Q8TCE9 139 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 SLC17A9Q9BYT1 436 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 SLA2Q9H6Q3 261 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
USP28-201ENST00000003302 HCN1O60741 890 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 PAICSP22234 425 aaKnown RBP9.84□□□□□ -0.83
USP28-201ENST00000003302 MGAT2Q10469 447 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 GALEQ14376 348 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 CLPPQ16740 277 aaPredicted RBP9.84□□□□□ -0.83
USP28-201ENST00000003302 TMEM196Q5HYL7 178 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 NHLRC1Q6VVB1 395 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 ZNF511Q8NB15 262 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 OR52B4Q8NGK2 314 aa9.84□□□□□ -0.83
USP28-201ENST00000003302 RFT1Q96AA3 541 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms