RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Olfr889L7N1Y6 314 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lancl1O89112 399 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 P01680 129 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 C2cd4dP0CG09 341 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cd40P27512 289 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Apex1P28352 317 aaKnown RBP13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ccr2P51683 373 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 CtseP70269 397 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rnf133Q14B02 382 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Treml4Q3LRV9 263 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Epha6Q62413 1035 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 WdcpQ6NV72 663 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tas2r104Q7M723 302 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cxcl16Q8BSU2 246 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Dppa4Q8CCG4 296 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hpf1Q8CFE2 346 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mchr1Q8JZL2 353 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Srpx2Q8R054 468 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ntng1Q8R4G0 539 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr474Q8VFC9 310 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr672Q8VG28 312 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Acy3Q91XE4 318 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Abhd3Q91ZH7 411 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Lims1Q99JW4 325 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Znf639Q99KZ6 485 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gins4Q99LZ3 223 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc25a30Q9CR58 291 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Q9CYS6 286 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 MmachcQ9CZD0 279 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gkn3Q9D0T7 191 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Zdhhc21Q9D270 265 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Arl13aQ9D416 372 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ethe1Q9DCM0 254 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 PtgesQ9JM51 153 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tcf7l1Q9Z1J1 584 aa13.44□□□□□ -0.26
Ercc1-201ENSMUST00000003645 KalrnA2CG49 2964 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cnot1Q6ZQ08 2375 aaKnown RBP13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Scn2aA0A0J9YTW6 2006 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm28363A0A087WQW2 129 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Igkv6-14A0A140T8P1 115 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm20489A2AGH5 449 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm3020E9Q3J7 150 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm42421F6X8D5 166 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gm20509G3UZF1 325 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Clk3O35492 638 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pole2O54956 527 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mup4P11590 178 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gbx2P48031 348 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cxcr4P70658 359 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gch1Q05915 241 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hyal4Q05A56 481 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 B3gnt3Q5JCS9 372 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc5a6Q5U4D8 634 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Pik3c3Q6PF93 887 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tas2r106Q7M724 308 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 PigvQ7TPN3 493 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Fbxo34Q80XI1 695 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Spag1Q80ZX8 901 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slitrk5Q810B7 957 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ccdc126Q8BIS8 140 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Nyap2Q8BM65 682 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Slc15a3Q8BPX9 578 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rae1Q8C570 368 aaKnown RBP13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Cpne5Q8JZW4 593 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 RfesdQ8K2P6 157 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 P2rx2Q8K3P1 485 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ntng2Q8R4F1 589 aaKnown RBP13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Olfr870Q8VGG4 311 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ddit4lQ8VHZ5 193 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rad51cQ924H5 366 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ptdss1Q99LH2 473 aaKnown RBP13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Art4Q9CRA0 300 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ist1Q9CX00 362 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Actrt1Q9D9J3 376 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Apbb2Q9DBR4 760 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hipk3Q9ERH7 1192 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Riox1Q9JJF3 603 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tagln3Q9R1Q8 199 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Aqp5Q9WTY4 265 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Gvin1Q80SU7 2427 aa13.43□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Spin2gA0A0N4SW15 236 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Rex2A2AWF2 685 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Wscd2D4PHA7 571 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 JhyE9Q793 770 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Vmn2r35E9Q7U8 861 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Serpinb9cI7HJI5 387 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Spin2eJ3QNQ0 234 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 TspearJ3S6Y1 670 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 H2-LP01897 362 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Tuba3aP05214 450 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Sstr3P30935 428 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 TpoP35419 914 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Idh2P54071 452 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Hoxd1Q01822 328 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 JupQ02257 745 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Mrgprb2Q3KNA1 338 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Jsrp1Q3MI48 332 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Secisbp2Q3U1C4 858 aaKnown RBP13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Ugt8Q64676 541 aa13.42□□□□□ -0.26
Ercc1-201ENSMUST00000003645 Znf511Q6P0X2 227 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms