RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SMPDL3BQ92485 455 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 ZG16BQ96DA0 208 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 TMCO6Q96DC7 493 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF597Q96LX8 424 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 FAM173AQ9BQD7 235 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 G6PC3Q9BUM1 346 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 THUMPD3Q9BV44 507 aaKnown RBP6.68□□□□□ -1.34
PHGDH-225ENST00000641720 RSPO3Q9BXY4 272 aaPredicted RBP6.68□□□□□ -1.34
PHGDH-225ENST00000641720 TBL1XR1Q9BZK7 514 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 SAP130Q9H0E3 1048 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 RAD21L1Q9H4I0 556 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 PIF1Q9H611 641 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 EFCAB1Q9HAE3 211 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 UBQLN4Q9NRR5 601 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 EXD2Q9NVH0 621 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 P2RX2Q9UBL9 471 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 FBXL2Q9UKC9 423 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 MRTO4Q9UKD2 239 aaKnown RBP6.68□□□□□ -1.34
PHGDH-225ENST00000641720 CORO2BQ9UQ03 480 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 C15orf41Q9Y2V0 281 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 WDR45Q9Y484 360 aa6.68□□□□□ -1.34
PHGDH-225ENST00000641720 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.68□□□□□ -1.34
PHGDH-225ENST00000641720 ARFGEF3Q5TH69 2177 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 MBD3L3A6NE82 208 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 AGAP5A6NIR3 686 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 EVPLLA8MZ36 301 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ALG1L2C9J202 215 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SNPHO15079 494 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 GMFGO60234 142 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 GCM2O75603 506 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 UGT2B17O75795 530 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ANGPTL1O95841 491 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 EPPINO95925 133 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 F12P00748 615 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 NPPAP01160 153 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 GUSBP08236 651 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PAX1P15863 534 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 AQP1P29972 269 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 LCN1P31025 176 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PCGF2P35227 344 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TIMP3P35625 211 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 CPOXP36551 454 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 MASP1P48740 699 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 CRYBA2P53672 197 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ATP12AP54707 1039 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PSMD4P55036 377 aaKnown RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PSME3P61289 254 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 RPP38P78345 283 aaKnown RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SLC25A3Q00325 362 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 CDK6Q00534 326 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF117Q03924 483 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SNTA1Q13424 505 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SCARB2Q14108 478 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 POU4F3Q15319 338 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF141Q15928 474 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 KLHL26Q53HC5 615 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TIGD3Q6B0B8 471 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SLC30A6Q6NXT4 461 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 LRRC74BQ6ZQY2 392 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 RINLQ6ZS11 566 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TRPM8Q7Z2W7 1104 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 COMTD1Q86VU5 262 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SLC22A16Q86VW1 577 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SLC15A3Q8IY34 581 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF619Q8N2I2 560 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF614Q8N883 585 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 OR10A6Q8NH74 314 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 MBD3L2Q8NHZ7 208 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF524Q96C55 264 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SH3YL1Q96HL8 342 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TMEM41AQ96HV5 264 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 JSRP1Q96MG2 331 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF583Q96ND8 569 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PRDM14Q9GZV8 571 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 SLC6A15Q9H2J7 730 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 UBQLN3Q9H347 655 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 TMEM38AQ9H6F2 299 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZFP64Q9NPA5 681 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 POLE3Q9NRF9 147 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 GID8Q9NWU2 228 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ABCD2Q9UBJ2 740 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 ZNF629Q9UEG4 869 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 FOXD3Q9UJU5 478 aaPredicted RBP6.67□□□□□ -1.34
PHGDH-225ENST00000641720 PACSIN3Q9UKS6 424 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 LIPT1Q9Y234 373 aa6.67□□□□□ -1.34
PHGDH-225ENST00000641720 IGLV3-32A0A0A0MS00 114 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 C15orf38-AP3S2A0A0A6YYH1 394 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 A0A1W2PQD3 144 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SERINC4A6NH21 518 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 TUBAL3A6NHL2 446 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 HSPB2A8KAH6 182 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 FAM220BPB1ANY3 271 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 C5orf58C9J3I9 102 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ACOT7O00154 380 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SCDO00767 359 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 ADAM11O75078 769 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 SNX4O95219 450 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 PGM3O95394 542 aa6.66□□□□□ -1.34
PHGDH-225ENST00000641720 UBL4AP11441 157 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms