RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZNF17P17021 662 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 FASP25445 335 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 PTGDSP41222 190 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 SLC1A3P43003 542 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
PHGDH-218ENST00000641491 CD97P48960 835 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 GAS1P54826 345 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 HOXC5Q00444 222 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 CCNIQ14094 377 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ENTPD8Q5MY95 495 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 RPUSD3Q6P087 351 aaKnown RBP11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ULK3Q6PHR2 472 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 CBLN3Q6UW01 205 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 FADS6Q8N9I5 356 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ZFP62Q8NB50 900 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-218ENST00000641491 FAM71CQ8NEG0 241 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 RNF138Q8WVD3 245 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 SLC38A4Q969I6 547 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 DDIT4LQ96D03 193 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 SLC41A3Q96GZ6 507 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 MRGPRX4Q96LA9 322 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 FRMD6Q96NE9 622 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 EPYCQ99645 322 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 DENND2DQ9H6A0 471 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF703Q9H7S9 590 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-218ENST00000641491 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 DEPPQ9NTK1 212 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 ICAM5Q9UMF0 924 aa11.78□□□□□ -0.52
PHGDH-218ENST00000641491 TCRBV5S2A0A599 114 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 FAAHO00519 579 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 KRT36O76013 467 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 GADD45GO95257 159 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 LDLRP01130 860 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 H1F0P07305 194 aaKnown RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TFPIP10646 304 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 THRBP10828 461 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 POU3F2P20265 443 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 FKBP2P26885 142 aaKnown RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 RRM2P31350 389 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 IFNGR2P38484 337 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 APOBEC1P41238 236 aaKnown RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 MAGEA5P43359 124 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 PMP22Q01453 160 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 RBPJQ06330 500 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 FOXF1Q12946 379 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TRAM2Q15035 370 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 NADK2Q4G0N4 442 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 SWT1Q5T5J6 900 aaKnown RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 C3orf33Q6P1S2 294 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TTC33Q6PID6 262 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 YRDCQ86U90 279 aaKnown RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 ADGRG5Q8IZF4 528 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 CDK20Q8IZL9 346 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM251Q8N6I4 163 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 C10orf53Q8N6V4 93 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 GPR119Q8TDV5 335 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 PYDC1Q8WXC3 89 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 SMPDL3BQ92485 455 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF300Q96RE9 604 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 BDH2Q9BUT1 245 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 NDEL1Q9GZM8 345 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 ACER3Q9NUN7 267 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 C6orf203Q9P0P8 240 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-218ENST00000641491 KIF17Q9P2E2 1029 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 SLC7A7Q9UM01 511 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TESMINQ9Y4I5 508 aa11.77□□□□□ -0.53
PHGDH-218ENST00000641491 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 TRGV5A0A0B4J1U4 118 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 A0A1B0GWA3 101 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 LRRC3CA6NJW4 275 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 NPIPA5E9PKD4 350 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 H3BML4 177 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 TNFRSF11BO00300 401 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 CHP2O43745 196 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 TPST2O60704 377 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ENTPD5O75356 428 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 WISP1O95388 367 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 MT-ND1P03886 318 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 CCNA2P20248 432 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ELK4P28324 431 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ADH6P28332 368 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 TACR3P29371 465 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 MAP2K6P52564 334 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 CRYBA2P53672 197 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 CDH12P55289 794 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 SESN3P58005 492 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 SELENBP1Q13228 472 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 LY6DQ14210 128 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 GK3PQ14409 553 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms