RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 UBQLN4Q9NRR5 601 aa6.81□□□□□ -1.32
PHGDH-217ENST00000641455 VPS29Q9UBQ0 182 aa6.81□□□□□ -1.32
PHGDH-217ENST00000641455 MALT1Q9UDY8 824 aa6.81□□□□□ -1.32
PHGDH-217ENST00000641455 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 IGHV1-18A0A0C4DH31 117 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 MYO1GB0I1T2 1018 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GTPBP1O00178 669 aaKnown RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SULT2B1O00204 365 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GPR171O14626 319 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 OIP5O43482 229 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SKAP2O75563 359 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 PSMG1O95456 288 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 H6PDO95479 791 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 AVPP01185 164 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 TFPIP10646 304 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 PRPS2P11908 318 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 PRKCAP17252 672 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 TSPAN8P19075 237 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 IVDP26440 423 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GPC1P35052 558 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 DIO1P49895 249 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 KHKP50053 298 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 P2RX1P51575 399 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CSNK2A1P68400 391 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 IL13RA1P78552 427 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 BTKQ06187 659 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 ACSM2AQ08AH3 577 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 C2orf80Q0P641 193 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 HSPB3Q12988 150 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 TRADDQ15628 312 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 TOMM34Q15785 309 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 NDUFAF6Q330K2 333 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GGTA1PQ4G0N0 100 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CCNJQ5T5M9 372 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GRTP1Q5TC63 336 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 ACSM2BQ68CK6 577 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 ABLIM2Q6H8Q1 611 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 METTL2BQ6P1Q9 378 aaKnown RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 C3orf33Q6P1S2 294 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CBLN3Q6UW01 205 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 C1orf229Q6ZS94 237 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 C1QL4Q86Z23 238 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CENPLQ8N0S6 344 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 ZNF614Q8N883 585 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 COX18Q8N8Q8 333 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SPC24Q8NBT2 197 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 C1orf162Q8NEQ5 155 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 OR6Y1Q8NGX8 325 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 NANPQ8TBE9 248 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 JADE3Q92613 823 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 ELP4Q96EB1 424 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 DNAJA3Q96EY1 480 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 OTUB1Q96FW1 271 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SLC38A2Q96QD8 506 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CCT8L2Q96SF2 557 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SHCBP1LQ9BZQ2 653 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GLIPR2Q9H4G4 154 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 NTN4Q9HB63 628 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 SLC52A3Q9NQ40 469 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.8□□□□□ -1.32
PHGDH-217ENST00000641455 GIN1Q9NXP7 522 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 PCTPQ9UKL6 214 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 CARD8Q9Y2G2 431 aa6.8□□□□□ -1.32
PHGDH-217ENST00000641455 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 A0A0G2JMP0 313 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 A0A0X1KG70 313 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 A0A1W2PQD3 144 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 TCRBV9S1A1TA0A576 114 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 POM121CA8CG34 1229 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 H3BNH8 94 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 PPIHO43447 177 aaKnown RBP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 KCNK2O95069 426 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 PRSS23O95084 383 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 NKX2-2O95096 273 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 OTCP00480 354 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 KRT6AP02538 564 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 KRT6BP04259 564 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 ADRA2AP08913 450 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 ANXA4P09525 319 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 ACP2P11117 423 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 CHN1P15882 459 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 NPR2P20594 1047 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 DDCP20711 480 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 ATP6V1C1P21283 382 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 TIA1P31483 386 aaKnown RBP eCLIP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 KRT6CP48668 564 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 SUMO3P55854 103 aaPredicted RBP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 RAE1P78406 368 aaKnown RBP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 ZP4Q12836 540 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 PRSS53Q2L4Q9 553 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 HIKESHIQ53FT3 197 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 SPIN4Q56A73 249 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 LETMD1Q6P1Q0 360 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 LRIG3Q6UXM1 1119 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 RPS27LQ71UM5 84 aaKnown RBP6.79□□□□□ -1.32
PHGDH-217ENST00000641455 CARM1Q86X55 608 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 CDK20Q8IZL9 346 aa6.79□□□□□ -1.32
PHGDH-217ENST00000641455 SIGLECL1Q8N7X8 197 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms