RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TRAV18A0A075B6X5 111 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TCRBV5S2A0A599 114 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 RELAQ04206 551 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SPIN3Q5JUX0 258 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SYT6Q5T7P8 510 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 BCL2L15Q5TBC7 163 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 FAM219BQ5XKK7 198 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 EIF5AL1Q6IS14 154 aaKnown RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SLC46A3Q7Z3Q1 461 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SPERTQ8NA61 448 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TBC1D15Q8TC07 691 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 OR5M11Q96RB7 305 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 OR10A5Q9H207 317 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TAS2R8Q9NYW2 309 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 M0R233 179 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 F13BP05160 661 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 IL7P13232 177 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 MLF2Q15773 248 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 PPP1R3BQ86XI6 285 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 ZNF417Q8TAU3 575 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 HLA-CQ95604 372 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TNFRSF13CQ96RJ3 184 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 MED20Q9H944 212 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 RPH3AQ9Y2J0 694 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TEX46H3BTG2 121 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 LCMT2O60294 686 aaKnown RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 CREBL2O60519 120 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SLC16A7O60669 478 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 MMP11P24347 488 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 OPRD1P41143 372 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 MAGEA2P43356 314 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 HSD11B2P80365 405 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 OR7A5Q15622 319 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 TBC1D25Q3MII6 688 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 CDNFQ49AH0 187 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 SLX4IPQ5VYV7 408 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 GPR139Q6DWJ6 353 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 NLRP8Q86W28 1048 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 GPR137CQ8N3F9 429 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 PATE1Q8WXA2 126 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 VN1R3Q9BXE9 311 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 FGF21Q9NSA1 209 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 ACER3Q9NUN7 267 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 FBXL3Q9UKT7 428 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 RASD1Q9Y272 281 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 WDR37Q9Y2I8 494 aa16.36■□□□□ 0.21
SCARB2-223ENST00000640640 A0A1B0GWA3 101 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 A6NIZ1 184 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 GABARAPO95166 117 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 PRR35P0CG20 571 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 CAPZA1P52907 286 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RAP1BP61224 184 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RAP1AP62834 184 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RNASE10Q5GAN6 216 aaKnown RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 C3orf38Q5JPI3 329 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 PARP16Q8N5Y8 322 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 OR14L1PQ8NHC6 308 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 ITPKCQ96DU7 683 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 ZNF701Q9NV72 531 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RABL2AQ9UBK7 228 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RABL2BQ9UNT1 228 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 B3GNT3Q9Y2A9 372 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 PCDHGA6Q9Y5G7 932 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 DCDC2BA2VCK2 349 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 SERINC4A6NH21 518 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 HSPA12AO43301 675 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 CTNSO60931 367 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 LIM2P55344 173 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 EIF2B1Q14232 305 aaKnown RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 OR5T2Q8NGG2 359 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 KATNB1Q9BVA0 655 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 SLC25A18Q9H1K4 315 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 C6orf106Q9H6K1 298 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 SLC7A11Q9UPY5 501 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 PTRH2Q9Y3E5 179 aaKnown RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 ASB4Q9Y574 426 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 I3L521 148 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 PLATP00750 562 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 JUNBP17275 347 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 ITGB8P26012 769 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 S100A10P60903 97 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 MANEAQ5SRI9 462 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 SAXO2Q658L1 398 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 ZNF582Q96NG8 517 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 CENPOQ9BU64 300 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 RBM24Q9BX46 236 aaKnown RBP16.35■□□□□ 0.21
SCARB2-223ENST00000640640 GSKIPQ9P0R6 139 aa16.35■□□□□ 0.21
SCARB2-223ENST00000640640 SYT7O43581 403 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 UGT2B10P36537 528 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 SLC35A2P78381 396 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 GDF7Q7Z4P5 450 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 LSM14AQ8ND56 463 aaKnown RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 RHBDD1Q8TEB9 315 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 TMEM255BQ8WV15 326 aa16.34■□□□□ 0.21
SCARB2-223ENST00000640640 HOXB13Q92826 284 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-223ENST00000640640 EID2BQ96D98 161 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms