RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 JSRP1Q96MG2 331 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-238ENST00000640421 EPYCQ99645 322 aa16.14■□□□□ 0.17
SPIN3-238ENST00000640421 TUBA8Q9NY65 449 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-238ENST00000640421 PCDHGA9Q9Y5G4 932 aaKnown RBP16.14■□□□□ 0.17
SPIN3-238ENST00000640421 MED12Q93074 2177 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 CDK2AP1O14519 115 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 NME2P1O60361 137 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 E2F6O75461 281 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 SNX4O95219 450 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 SP1P08047 785 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 PGCP20142 388 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 CNR1P21554 472 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 NME2P22392 152 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 PRKACGP22612 351 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 DNAJA1P31689 397 aaKnown RBP16.13■□□□□ 0.17
SPIN3-238ENST00000640421 QPRTQ15274 297 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 SNCBQ16143 134 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 OGFRL1Q5TC84 451 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-238ENST00000640421 TIGD3Q6B0B8 471 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 WBP2NLQ6ICG8 309 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF613Q6PF04 617 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 PACS2Q86VP3 889 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 SULF2Q8IWU5 870 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 POLR2J2Q9GZM3 115 aaKnown RBP16.13■□□□□ 0.17
SPIN3-238ENST00000640421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPIN3-238ENST00000640421 POLR2J3Q9H1A7 115 aaKnown RBP16.13■□□□□ 0.17
SPIN3-238ENST00000640421 TMEM27Q9HBJ8 222 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 VDAC3Q9Y277 283 aa16.13■□□□□ 0.17
SPIN3-238ENST00000640421 FPR1P21462 350 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 MSX1P28360 303 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 MASP1P48740 699 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SUMO3P55854 103 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-238ENST00000640421 COPZ1P61923 177 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 FOXK1P85037 733 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 ST3GAL3Q11203 375 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 ALG10BQ5I7T1 473 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 PODNL1Q6PEZ8 512 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SHQ1Q6PI26 577 aaKnown RBP16.12■□□□□ 0.17
SPIN3-238ENST00000640421 GALNTL5Q7Z4T8 443 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 OR2M7Q8NG81 312 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 OR1J4Q8NGS1 313 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF563Q8TA94 476 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 TMEM255BQ8WV15 326 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 ALPK1Q96QP1 1244 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SLC29A1Q99808 456 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 MED17Q9NVC6 651 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 MAP1BP46821 2468 aaKnown RBP16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SHISA8B8ZZ34 492 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SOCS2O14508 198 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 FREM3P0C091 2139 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 RFPL3SP0C7P2 107 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SLC1A3P43003 542 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 TRAM2Q15035 370 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SLC25A25Q6KCM7 469 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 OR4K17Q8NGC6 315 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 OR5K1Q8NHB7 308 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 EME1Q96AY2 570 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 SCMH1Q96GD3 660 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 ADAM19Q9H013 955 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 TAS2R10Q9NYW0 307 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 STOML1Q9UBI4 398 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 MPDZO75970 2070 aa16.12■□□□□ 0.17
SPIN3-238ENST00000640421 A0A087WUU8 490 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 G3V2T6 193 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 CHP2O43745 196 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 PEX1O43933 1283 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 PRKCAP17252 672 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 TCEA1P23193 301 aaKnown RBP16.11■□□□□ 0.17
SPIN3-238ENST00000640421 RFC3P40938 356 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 PLPPR5Q32ZL2 321 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF766Q5HY98 468 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-238ENST00000640421 ULK3Q6PHR2 472 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 ATG4DQ86TL0 474 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-238ENST00000640421 OR9Q2Q8NGE9 314 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 RNF217Q8TC41 542 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 NR4A3Q92570 626 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 SLC38A4Q969I6 547 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 C1GALT1C1Q96EU7 318 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 FAM173AQ9BQD7 235 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 COQ10BQ9H8M1 238 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 RPS6KB2Q9UBS0 482 aa16.11■□□□□ 0.17
SPIN3-238ENST00000640421 TLN1Q9Y490 2541 aaKnown RBP16.11■□□□□ 0.17
SPIN3-238ENST00000640421 SH3PXD2BA1X283 911 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 THRBP10828 461 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 UQCRBP14927 111 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 CD46P15529 392 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 TACR3P29371 465 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 MICAQ29983 383 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF770Q6IQ21 691 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-238ENST00000640421 IGFL3Q6UXB1 125 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 LINC00114Q6XXX2 140 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 ZDHHC13Q8IUH4 622 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 P3H2Q8IVL5 708 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 CBR4Q8N4T8 237 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-238ENST00000640421 ZNF426Q9BUY5 554 aa16.1■□□□□ 0.17
SPIN3-238ENST00000640421 PDP1Q9P0J1 537 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms