RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 OR7A17O14581 309 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 XPNPEP2O43895 674 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 F2RP25116 425 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HOXC9P31274 260 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 GKP32189 559 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PBX1P40424 430 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 NRIP1P48552 1158 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 CSNK1A1P48729 337 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 FCGRTP55899 365 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HYAL4Q2M3T9 481 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM41BQ5BJD5 291 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 STEAP1BQ6NZ63 245 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HACD2Q6Y1H2 254 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMUB2Q71RG4 321 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ANKARQ7Z5J8 1434 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 RTN4RL1Q86UN2 441 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 SNX29P2Q8IUI4 249 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 SLX4Q8IY92 1834 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 OR56A1Q8NGH5 318 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 DVL3Q92997 716 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PWWP2AQ96N64 755 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PLEKHF1Q96S99 279 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TRMT61BQ9BVS5 477 aaKnown RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ATG10Q9H0Y0 220 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PRDM13Q9H4Q3 707 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 STEAP1Q9UHE8 339 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 COLEC10Q9Y6Z7 277 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 OOEPA6NGQ2 149 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 A8MWP6 167 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 XRCC2O43543 280 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 C6orf47O95873 294 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HPP00738 406 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HPRP00739 348 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 IGFBP4P22692 258 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 LHCGRP22888 699 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ICAM3P32942 547 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 MTM1Q13496 603 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PYCR3Q53H96 274 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 OCIAD2Q56VL3 154 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 GLT6D1Q7Z4J2 308 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ZBTB2Q8N680 514 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ZNF614Q8N883 585 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM239Q8WW34 195 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 FAM131CQ96AQ9 280 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PCIF1Q9H4Z3 704 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 SIDT1Q9NXL6 827 aaKnown RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TNFRSF18Q9Y5U5 241 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 CCDC195A0A1B0GUA6 201 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HYKKA2RU49 373 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 GH1P01241 217 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 RLN1P04808 185 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 CSF1P09603 554 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 CEACAM8P31997 349 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 HTR5AP47898 357 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 RPS20P60866 119 aaKnown RBP4.03□□□□□ -1.76
SCN3A-209ENST00000639244 DHODHQ02127 395 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PGM5Q15124 567 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 EXT1Q16394 746 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 IQCJQ1A5X6 159 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 C4orf32Q8N8J7 132 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 SPPL2AQ8TCT8 520 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ADAMTS17Q8TE56 1095 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 WFDC12Q8WWY7 111 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TFAP2CQ92754 450 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM45BQ96B21 275 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM43Q9BTV4 400 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM134Q9H6X4 195 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 ACTR8Q9H981 624 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 TMEM161AQ9NX61 479 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 LGALS13Q9UHV8 139 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
SCN3A-209ENST00000639244 SDK2Q58EX2 2172 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 OR56A5P0C7T3 313 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 PGAM1P18669 254 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 TNFRSF1AP19438 455 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 SLC6A8P48029 635 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 RFX3P48380 749 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 CRYBA4P53673 196 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 EMX1Q04741 257 aaPredicted RBP4.03□□□□□ -1.77
SCN3A-209ENST00000639244 TUBB3Q13509 450 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 RHEBQ15382 184 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 NKAIN2Q5VXU1 208 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 DHRS7BQ6IAN0 325 aaPredicted RBP4.03□□□□□ -1.77
SCN3A-209ENST00000639244 SLC16A9Q7RTY1 509 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 NAXDQ8IW45 347 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 JAGN1Q8N5M9 183 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF555Q8NEP9 628 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 SLC45A3Q96JT2 553 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 NECTIN4Q96NY8 510 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 OR52E6Q96RD3 313 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 TMEM38AQ9H6F2 299 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 BCAS3Q9H6U6 928 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 FKRPQ9H9S5 495 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 SERGEFQ9UGK8 458 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 ARHGAP32A7KAX9 2087 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 CAMSAP1Q5T5Y3 1602 aa4.03□□□□□ -1.77
SCN3A-209ENST00000639244 ASTN1O14525 1302 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms