RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 VITQ6UXI7 678 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 DGLUCYQ7Z3D6 616 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR4E2Q8NGC2 313 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 DUSP22Q9NRW4 184 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 MAT2BQ9NZL9 334 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 ABRACLQ9P1F3 81 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF222Q9UK12 451 aa18.62■□□□□ 0.57
SYNGAP1-227ENST00000638142 TEX13CA0A0J9YWL9 993 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 SERPINA3P01011 423 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 TRMT12Q53H54 448 aaKnown RBP18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 FHL5Q5TD97 284 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF655Q8N720 491 aaPredicted RBP18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 C7orf50Q9BRJ6 194 aaKnown RBP18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 C14orf105Q9NVL8 296 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 GLTPQ9NZD2 209 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 FBXL21Q9UKT6 434 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 MGAT4AQ9UM21 535 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 MEN1O00255 615 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 SMIM10L1P0DMW3 83 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 WASP42768 502 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 RAG2P55895 527 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 SNRPNP63162 240 aaKnown RBP18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 CRMP1Q14194 572 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 RPTNQ6XPR3 784 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF680Q8NEM1 530 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 ADAMTS14Q8WXS8 1223 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 GHSRQ92847 366 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 SMIM10Q96HG1 83 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 ADAP2Q9NPF8 381 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLCO1C1Q9NYB5 712 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 KCNE5Q9UJ90 142 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 DAPP1Q9UN19 280 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 RNF215Q9Y6U7 377 aa18.61■□□□□ 0.57
SYNGAP1-227ENST00000638142 PEX12O00623 359 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 HYAL3O43820 417 aaPredicted RBP18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 B3GALT2O43825 422 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 PTP4A3O75365 173 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 TPOP07202 933 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 PYCR1P32322 319 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 RUNX2Q13950 521 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF613Q6PF04 617 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 BAIAP2L2Q6UXY1 529 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 LUZP2Q86TE4 346 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 COX18Q8N8Q8 333 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 CDRT4Q8N9R6 151 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR5J2Q8NH18 312 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 HAVCR2Q8TDQ0 301 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 STACQ99469 402 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 ST6GALNAC2Q9UJ37 374 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 SCN3AQ9NY46 2000 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 RAF1P04049 648 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 CLUP10909 449 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 IGFALSP35858 605 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 DBPQ10586 325 aaPredicted RBP18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 DEFB134Q4QY38 66 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 FAAH2Q6GMR7 532 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 SIAH3Q8IW03 269 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 SIX5Q8N196 739 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 C12orf76Q8N812 135 aaPredicted RBP18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZCCHC10Q8TBK6 192 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 PMM1Q92871 262 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 TM4SF19Q96DZ7 209 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 CACNG6Q9BXT2 260 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 NARFLQ9H6Q4 476 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 CXXC1Q9P0U4 656 aaPredicted RBP18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 NUP50Q9UKX7 468 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC22A7Q9Y694 548 aa18.6■□□□□ 0.57
SYNGAP1-227ENST00000638142 TRAV27A0A087WT01 109 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 A0A087WV62 115 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 NARSO43776 548 aaKnown RBP18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 AK1P00568 194 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 CD3GP09693 182 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 GIFP27352 417 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 GJA4P35212 333 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 C2orf27AQ580R0 203 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 FCRLBQ6BAA4 426 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 TIGD4Q8IY51 512 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC22A18Q96BI1 424 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 APOOQ9BUR5 198 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 MFRPQ9BY79 579 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZCCHC4Q9H5U6 513 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 MEPEQ9NQ76 525 aaPredicted RBP18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SPEF1Q9Y4P9 236 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 URADA6NGE7 173 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 LRRN3E7EW58 273 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 FBXO42Q6P3S6 717 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZCCHC12Q6PEW1 402 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 PSRC1Q6PGN9 363 aaPredicted RBP18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 LSRQ86X29 649 aaPredicted RBP18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC43A2Q8N370 569 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 CYB561A3Q8NBI2 242 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 OR51A7Q8NH64 312 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 HGDQ93099 445 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SCARF2Q96GP6 870 aaPredicted RBP18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF559Q9BR84 538 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SLC17A9Q9BYT1 436 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 LRRN3Q9H3W5 708 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 TMEM27Q9HBJ8 222 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 FBXO34Q9NWN3 711 aa18.59■□□□□ 0.57
SYNGAP1-227ENST00000638142 SCAMP1O15126 338 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms