RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PIWIL2Q8TC59 973 aaKnown RBP15.81■□□□□ 0.12
PNKP-230ENST00000638016 NINJ1Q92982 152 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 ZBTB18Q99592 522 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 SAP130Q9H0E3 1048 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 SLC38A1Q9H2H9 487 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 PLSCR4Q9NRQ2 329 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 PAQR5Q9NXK6 330 aaPredicted RBP15.81■□□□□ 0.12
PNKP-230ENST00000638016 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 NDRG3Q9UGV2 375 aa15.81■□□□□ 0.12
PNKP-230ENST00000638016 UQCRHLA0A096LP55 91 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 SLCO1B7G3V0H7 640 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 ETV2O00321 342 aaPredicted RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 AP3D1O14617 1153 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 CASKO14936 926 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 ATE1O95260 518 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 THBDP07204 575 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 MVDP53602 400 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 MERTKQ12866 999 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 TSC22D1Q15714 1073 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 MAPK11Q15759 364 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 PDSS1Q5T2R2 415 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 STAC2Q6ZMT1 411 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 EIF3MQ7L2H7 374 aaKnown RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 TUSC5Q8IXB3 177 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 CNOT9Q92600 299 aaKnown RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 CPNE4Q96A23 557 aaPredicted RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 VPS33AQ96AX1 596 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 PIK3IP1Q96FE7 263 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 AURKBQ96GD4 344 aaPredicted RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 SLC39A3Q9BRY0 314 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 CXXC4Q9H2H0 198 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 ING1Q9UK53 422 aaPredicted RBP15.8■□□□□ 0.12
PNKP-230ENST00000638016 USH1CQ9Y6N9 552 aa15.8■□□□□ 0.12
PNKP-230ENST00000638016 RFXANKO14593 260 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 KLF11O14901 512 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 SLC22A3O75751 556 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 AGR2O95994 175 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 IDO1P14902 403 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 DNASE1P24855 282 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 EDNRAP25101 427 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 LOXP28300 417 aaPredicted RBP15.79■□□□□ 0.12
PNKP-230ENST00000638016 SLC7A1P30825 629 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 HPCAP84074 193 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 PLEKHM3Q6ZWE6 761 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 FCRLAQ7L513 359 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.79■□□□□ 0.12
PNKP-230ENST00000638016 OR5B2Q96R09 309 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 FOXC2Q99958 501 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 EBF4Q9BQW3 602 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 CTPS2Q9NRF8 586 aa15.79■□□□□ 0.12
PNKP-230ENST00000638016 SDR39U1Q9NRG7 319 aaPredicted RBP15.79■□□□□ 0.12
PNKP-230ENST00000638016 SMAD9O15198 467 aaKnown RBP15.78■□□□□ 0.12
PNKP-230ENST00000638016 UBDO15205 165 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 RAF1P04049 648 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 ETFAP13804 333 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 CD1EP15812 388 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 CRYGSP22914 178 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 KCNJ10P78508 379 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 C3orf33Q6P1S2 294 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 EPGNQ6UW88 154 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 TFAP2EQ6VUC0 442 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 GLB1L3Q8NCI6 653 aaPredicted RBP15.78■□□□□ 0.12
PNKP-230ENST00000638016 ZNF775Q96BV0 537 aaPredicted RBP15.78■□□□□ 0.12
PNKP-230ENST00000638016 ATP6V1G3Q96LB4 118 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 ZNF300Q96RE9 604 aaPredicted RBP15.78■□□□□ 0.12
PNKP-230ENST00000638016 OR11A1Q9GZK7 315 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 POLE3Q9NRF9 147 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 ACER3Q9NUN7 267 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 ZIM2Q9NZV7 527 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 KLHL13Q9P2N7 655 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 MAP1AP78559 2803 aaPredicted RBP15.78■□□□□ 0.12
PNKP-230ENST00000638016 C2CD3Q4AC94 2353 aa15.78■□□□□ 0.12
PNKP-230ENST00000638016 VPS13CQ709C8 3753 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 GJE1A6NN92 205 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 IL6P05231 212 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 GUSBP08236 651 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 CD53P19397 219 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 PGCP20142 388 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 CCNA2P20248 432 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 PCYT1AP49585 367 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 KEAP1Q14145 624 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 RPS26P11Q5JNZ5 115 aaPredicted RBP15.77■□□□□ 0.12
PNKP-230ENST00000638016 SLC2A7Q6PXP3 512 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 TRIML2Q8N7C3 387 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 ZNF563Q8TA94 476 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 ST8SIA1Q92185 356 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 REXO5Q96IC2 774 aaKnown RBP15.77■□□□□ 0.12
PNKP-230ENST00000638016 ARL5BQ96KC2 179 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 C7orf26Q96N11 449 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 TRNT1Q96Q11 434 aaKnown RBP15.77■□□□□ 0.12
PNKP-230ENST00000638016 PSD2Q9BQI7 771 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 CCDC106Q9BWC9 280 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 GLRX2Q9NS18 164 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 SLC35A3Q9Y2D2 325 aa15.77■□□□□ 0.12
PNKP-230ENST00000638016 RAI1Q7Z5J4 1906 aaPredicted RBP15.76■□□□□ 0.11
PNKP-230ENST00000638016 AGAP5A6NIR3 686 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 FESP07332 822 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 NR2F1P10589 423 aa15.76■□□□□ 0.11
PNKP-230ENST00000638016 RPS4Y1P22090 263 aaKnown RBP15.76■□□□□ 0.11
PNKP-230ENST00000638016 IDH2P48735 452 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms