RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 ARV1Q9H2C2 271 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 PDE7BQ9NP56 450 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 OR2S2Q9NQN1 319 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 SCML2Q9UQR0 700 aa5.38□□□□□ -1.55
SCN1A-216ENST00000637968 VSTM5A8MXK1 200 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF821O75541 412 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 IFNA21P01568 189 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 GIMD1P0DJR0 217 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PPIBP23284 216 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NDUFS1P28331 727 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FHITP49789 147 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 AGFG1P52594 562 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 MAP4K2Q12851 820 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ARHGAP11BQ3KRB8 267 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NKAIN1Q4KMZ8 207 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZRANB3Q5FWF4 1079 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RAB41Q5JT25 222 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TMEM244Q5VVB8 128 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ENPP7Q6UWV6 458 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 APOOLQ6UXV4 268 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF567Q8N184 647 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZFP41Q8N8Y5 198 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 OR52E4Q8NGH9 312 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 M1APQ8TC57 530 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 MRGPRDQ8TDS7 321 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SOCS4Q8WXH5 440 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 WNT2BQ93097 391 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ADIPOR1Q96A54 375 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 CMBLQ96DG6 245 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TBL1YQ9BQ87 522 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NAA11Q9BSU3 229 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FAIM2Q9BWQ8 316 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PARD6GQ9BYG4 376 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SLITRK2Q9H156 845 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FBXO44Q9H4M3 255 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FZD3Q9NPG1 666 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 WBP1LQ9NX94 342 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 DOK5Q9P104 306 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ARHGAP28Q9P2N2 729 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 MYOTQ9UBF9 498 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 WIF1Q9Y5W5 379 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 A0A0G2JN53 185 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 A6NJY4 79 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SYT5O00445 386 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PRRG1O14668 218 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 EFSO43281 561 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TLX2O43763 284 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RDH16O75452 317 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SLC25A12O75746 678 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 HPXP02790 462 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 HOXC6P09630 235 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 AVPR2P30518 371 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 IGFALSP35858 605 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SREBF1P36956 1147 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF140P52738 457 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PGGT1BP53609 377 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 SMIM11AP58511 58 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RANP62826 216 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 DHODHQ02127 395 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PTGES3Q15185 160 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 INPP5JQ15735 1006 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NKG7Q16617 165 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PLEKHN1Q494U1 663 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 C1orf220Q5T0J3 134 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 KIAA0930Q6ICG6 404 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 UNQ6126/PRO20091Q6UXV3 157 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 GLDNQ6ZMI3 551 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 CYHR1Q6ZMK1 362 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF836Q6ZNA1 936 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 VTCN1Q7Z7D3 282 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 GMCL1P1Q8NEA9 526 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TGM7Q96PF1 710 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FDXACB1Q9BRP7 624 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RPF1Q9H9Y2 349 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TLR8Q9NR97 1041 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 UBQLN4Q9NRR5 601 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TAS2R5Q9NYW4 299 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NCDNQ9UBB6 729 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 CLEC2DQ9UHP7 191 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PADI1Q9ULC6 663 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 A4GNTQ9UNA3 340 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 FLVCR2Q9UPI3 526 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RASD1Q9Y272 281 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 KCTD3Q9Y597 815 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 C7orf77A4D0Y5 90 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 C5orf51A6NDU8 294 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 RNF212BA8MTL3 300 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 NPC1O15118 1278 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 MOSPD3O75425 235 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 PRH1P02810 166 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 GSTP1P09211 210 aaKnown RBP5.37□□□□□ -1.55
SCN1A-216ENST00000637968 EPXP11678 715 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 CPEP16870 476 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 CTHP32929 405 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 TAF6P49848 677 aa5.37□□□□□ -1.55
SCN1A-216ENST00000637968 OR10A3P58181 314 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms