RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FAM120CQ9NX05 1096 aaKnown RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 ST6GALNAC2Q9UJ37 374 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 MAGEL2Q9UJ55 1249 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 KCNE5Q9UJ90 142 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 RIMS3Q9UJD0 308 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 ABCG2Q9UNQ0 655 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 PLEKHA6Q9Y2H5 1048 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 OR10H1Q9Y4A9 318 aa7.05□□□□□ -1.28
PNKP-229ENST00000637897 FLNAP21333 2647 aaKnown RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
PNKP-229ENST00000637897 DEFB108AA8MXU0 73 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 ALG1L2C9J202 215 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 NPIPB9F8W1W9 429 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 SCAMP2O15127 329 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 ARPC2O15144 300 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 PDPK1O15530 556 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 GMFGO60234 142 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 BCAS1O75363 584 aaPredicted RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 SLITRK5O94991 958 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 ATE1O95260 518 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 OPN1LWP04000 364 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 RPSAP08865 295 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 EPXP11678 715 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 FCGR1AP12314 374 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 HK1P19367 917 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 KLK2P20151 261 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 HPCAL1P37235 193 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 RPL3P39023 403 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 RFX3P48380 749 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 HSPA13P48723 471 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 ART1P52961 327 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 MLC1Q15049 377 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 FXNQ16595 210 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 MTX3Q5HYI7 312 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 RABL3Q5HYI8 236 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 LRIF1Q5T3J3 769 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 CBLN3Q6UW01 205 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 CLEC4FQ8N1N0 589 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 METTL25Q8N6Q8 603 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 GATSQ8NAP1 163 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 OR4K17Q8NGC6 315 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 FNDC9Q8TBE3 224 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 FAM222BQ8WU58 562 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 PPCDCQ96CD2 204 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 COQ8BQ96D53 544 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 CCDC115Q96NT0 180 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 PRPF18Q99633 342 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 PIGQQ9BRB3 760 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 SFXN3Q9BWM7 321 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 RBM24Q9BX46 236 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 POLDIP3Q9BY77 421 aaKnown RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 OPN3Q9H1Y3 402 aaPredicted RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 CLEC4MQ9H2X3 399 aaPredicted RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 BATF3Q9NR55 127 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 ACSS1Q9NUB1 689 aaPredicted RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 GIMAP4Q9NUV9 329 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 SH3BP4Q9P0V3 963 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 PPP4R1LQ9P1A2 415 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.04□□□□□ -1.28
PNKP-229ENST00000637897 DTNAQ9Y4J8 743 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 ARID1AO14497 2285 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 NAV3Q8IVL0 2385 aa7.04□□□□□ -1.28
PNKP-229ENST00000637897 CADP27708 2225 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 A0A0J9YW62 118 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 A0A1W2PRB8 838 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 DHRS12A0PJE2 317 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 PRAMEF27A3QJZ7 478 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 TUBAL3A6NHL2 446 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 EEF1E1-BLOC1S5C9J1V9 151 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 H0YJX3 145 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 EEF1E1O43324 174 aaKnown RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 C6orf47O95873 294 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 HMGN2P05204 90 aaKnown RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 THBDP07204 575 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 NGFRP08138 427 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 LINGO3P0C6S8 592 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 ATP6V1B2P21281 511 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 TBXA2RP21731 343 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 PEX2P28328 305 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 NTSP30990 170 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 PRIM2P49643 509 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 GTF2A1P52655 376 aaPredicted RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 PRKAG1P54619 331 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 MANFP55145 182 aaKnown RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 HBA1P69905 142 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 SORDQ00796 357 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 LASP1Q14847 261 aaKnown RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 POU4F3Q15319 338 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 TOMM34Q15785 309 aaPredicted RBP7.03□□□□□ -1.28
PNKP-229ENST00000637897 DECR1Q16698 335 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 PGS1Q32NB8 556 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 PLPPR5Q32ZL2 321 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 NDUFAF6Q330K2 333 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 RUNDC3AQ59EK9 446 aa7.03□□□□□ -1.28
PNKP-229ENST00000637897 LPCAT4Q643R3 524 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms