RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 YES1P07947 543 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 ENPP1P22413 925 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 CSNK2A1P68400 391 aaPredicted RBP16.91■□□□□ 0.3
CLN6-221ENST00000637494 GNA13Q14344 377 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 BEX5Q5H9J7 111 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 STAC2Q6ZMT1 411 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 OLIG3Q7RTU3 272 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 RNF130Q86XS8 419 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 TUSC5Q8IXB3 177 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 STEAP2Q8NFT2 490 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 SLC25A43Q8WUT9 341 aaPredicted RBP16.91■□□□□ 0.3
CLN6-221ENST00000637494 SAP130Q9H0E3 1048 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 UBTD1Q9HAC8 227 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 TMBIM4Q9HC24 238 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 ACER3Q9NUN7 267 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 KCNE5Q9UJ90 142 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 GPR45Q9Y5Y3 372 aa16.91■□□□□ 0.3
CLN6-221ENST00000637494 NUP214P35658 2090 aaPredicted RBP16.91■□□□□ 0.3
CLN6-221ENST00000637494 A0A1W2PNR3 127 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 ETV2O00321 342 aaPredicted RBP16.9■□□□□ 0.3
CLN6-221ENST00000637494 RFXANKO14593 260 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 ARHGEF9O43307 516 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 SLC22A3O75751 556 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 H6PDO95479 791 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 ANP32DO95626 131 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 KRT75O95678 551 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 CD53P19397 219 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 FKBP2P26885 142 aaKnown RBP16.9■□□□□ 0.3
CLN6-221ENST00000637494 APOBEC1P41238 236 aaKnown RBP16.9■□□□□ 0.3
CLN6-221ENST00000637494 NR1H2P55055 460 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 SESN3P58005 492 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 ACKR1Q16570 336 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 FRRS1Q6ZNA5 592 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 ZHX1-C8orf76Q96EF9 292 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 TEX37Q96LM6 180 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 TRNT1Q96Q11 434 aaKnown RBP16.9■□□□□ 0.3
CLN6-221ENST00000637494 ACTR6Q9GZN1 396 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 QRSL1Q9H0R6 528 aaKnown RBP16.9■□□□□ 0.3
CLN6-221ENST00000637494 RMND5AQ9H871 391 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 COQ10BQ9H8M1 238 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 CELSR1Q9NYQ6 3014 aa16.9■□□□□ 0.3
CLN6-221ENST00000637494 A0A1W2PPR1 153 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 SULT2B1O00204 365 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 HMGN4O00479 90 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 DNAJA2O60884 412 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 SMPD2O60906 423 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 NR2F1P10589 423 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 TFPIP10646 304 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 UQCRBP14927 111 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PSMB1P20618 241 aaKnown RBP16.89■□□□□ 0.29
CLN6-221ENST00000637494 IL32P24001 234 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 RYKP34925 604 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PGM1P36871 562 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 KCNJ10P78508 379 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 RASGEF1BQ0VAM2 473 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 MAPK14Q16539 360 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 GSTA3Q16772 222 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PDCD4Q53EL6 469 aaKnown RBP16.89■□□□□ 0.29
CLN6-221ENST00000637494 C20orf204Q6ZNR8 217 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PLEKHM3Q6ZWE6 761 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 WFDC8Q8IUA0 241 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 P3H2Q8IVL5 708 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 CMIPQ8IY22 773 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PIWIL2Q8TC59 973 aaKnown RBP16.89■□□□□ 0.29
CLN6-221ENST00000637494 PMM1Q92871 262 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 TLCD1Q96CP7 247 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 CCL19Q99731 98 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 PIP5K1AQ99755 562 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 EXOSC3Q9NQT5 275 aaKnown RBP16.89■□□□□ 0.29
CLN6-221ENST00000637494 AKAP9Q99996 3911 aa16.89■□□□□ 0.29
CLN6-221ENST00000637494 HIVEP1P15822 2718 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 IGHV3-15A0A0B4J1V0 119 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 CENPVL1A0A0U1RR11 272 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 C9JVG2 144 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 SIAH2O43255 324 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 IL7RP16871 459 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 IL12AP29459 219 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 MAGEA8P43361 318 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 ADAM8P78325 824 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 NKX6-1P78426 367 aaPredicted RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 CHRNEQ04844 493 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 FUT5Q11128 374 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 SYT14P1Q58G82 188 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 BEND6Q5SZJ8 279 aaPredicted RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 SHEQ5VZ18 495 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 AP1ARQ63HQ0 302 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 TFAP2EQ6VUC0 442 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 NUFIP2Q7Z417 695 aaKnown RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 GRINAQ7Z429 371 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 CXorf67Q86X51 503 aaPredicted RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 FAM71CQ8NEG0 241 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 USB1Q9BQ65 265 aaKnown RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 INPP5KQ9BT40 448 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 MTHFD2LQ9H903 347 aaPredicted RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 CACYBPQ9HB71 228 aaKnown RBP16.88■□□□□ 0.29
CLN6-221ENST00000637494 NGBQ9NPG2 151 aa16.88■□□□□ 0.29
CLN6-221ENST00000637494 EMC3Q9P0I2 261 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms