RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 GOSR1O95249 250 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 C1QCP02747 245 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 POU2F1P14859 743 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 CARD18P57730 90 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 FAM27E3Q08E93 113 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 POU4F3Q15319 338 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 MAPK14Q16539 360 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 ZNF239Q16600 458 aaKnown RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 ZNF474Q6S9Z5 364 aaPredicted RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 ATP6V1C2Q8NEY4 427 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 OR6K3Q8NGY3 331 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 PNPT1Q8TCS8 783 aaKnown RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 ZFP90Q8TF47 636 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 REXO5Q96IC2 774 aaKnown RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 THUMPD3Q9BV44 507 aaKnown RBP16.44■□□□□ 0.22
CLN6-214ENST00000636314 SAP130Q9H0E3 1048 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 PLEKHF2Q9H8W4 249 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 GLRX2Q9NS18 164 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 ELOVL5Q9NYP7 299 aa16.44■□□□□ 0.22
CLN6-214ENST00000636314 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
CLN6-214ENST00000636314 EFNA2O43921 213 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 H6PDO95479 791 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 ANP32DO95626 131 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 NTN1O95631 604 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 KRT75O95678 551 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 CGAP01215 116 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 PGCP20142 388 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 SLC7A1P30825 629 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 HOXC12P31275 282 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 PCYT1AP49585 367 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 TMEM176BQ3YBM2 270 aaPredicted RBP16.43■□□□□ 0.22
CLN6-214ENST00000636314 TIGD2Q4W5G0 525 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 EPGNQ6UW88 154 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 HDXQ7Z353 690 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 MIER2Q8N344 545 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 ZNF610Q8N9Z0 462 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 OR9I1Q8NGQ6 314 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 TMEM234Q8WY98 164 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 ST8SIA1Q92185 356 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 TRNT1Q96Q11 434 aaKnown RBP16.43■□□□□ 0.22
CLN6-214ENST00000636314 RMND5AQ9H871 391 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 SLCO1B3Q9NPD5 702 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 LIPT1Q9Y234 373 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 TESMINQ9Y4I5 508 aa16.43■□□□□ 0.22
CLN6-214ENST00000636314 PRAMEF27A3QJZ7 478 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 ETV2O00321 342 aaPredicted RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 CASKO14936 926 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 CCKARP32238 428 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 PGM1P36871 562 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 POLR2JP52435 117 aaKnown RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 STX1BP61266 288 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 NKX6-1P78426 367 aaPredicted RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 CHRNEQ04844 493 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 SYPL1Q16563 259 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 COX20Q5RI15 118 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 GTF2IRD2BQ6EKJ0 949 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 MSANTD1Q6ZTZ1 278 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 GTF2IRD2Q86UP8 949 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 FAM71CQ8NEG0 241 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 RNF128Q8TEB7 428 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 ROBO4Q8WZ75 1007 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 ZNF524Q96C55 264 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 SRXN1Q9BYN0 137 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 COQ10BQ9H8M1 238 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 TCF7L2Q9NQB0 619 aa16.42■□□□□ 0.22
CLN6-214ENST00000636314 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.42■□□□□ 0.22
CLN6-214ENST00000636314 HMGB1P1B2RPK0 211 aaPredicted RBP16.41■□□□□ 0.22
CLN6-214ENST00000636314 DNAJA2O60884 412 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 CHRM4P08173 479 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 NR2F1P10589 423 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 CD53P19397 219 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 AGTR1P30556 359 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 UGT2B10P36537 528 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 SESN3P58005 492 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 EXOC3L2Q2M3D2 409 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 C6orf10Q5SRN2 563 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 LRRC74BQ6ZQY2 392 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 KRTAP1-3Q8IUG1 177 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 ZNF563Q8TA94 476 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 ITCHQ96J02 903 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 MED18Q9BUE0 208 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 SERINC1Q9NRX5 453 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 SLC6A13Q9NSD5 602 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 BEX4Q9NWD9 120 aaPredicted RBP16.41■□□□□ 0.22
CLN6-214ENST00000636314 KLHL28Q9NXS3 571 aa16.41■□□□□ 0.22
CLN6-214ENST00000636314 A0A1W2PNR3 127 aa16.4■□□□□ 0.22
CLN6-214ENST00000636314 FAM234BA2RU67 622 aa16.4■□□□□ 0.22
CLN6-214ENST00000636314 C16orf97H3BN30 126 aa16.4■□□□□ 0.22
CLN6-214ENST00000636314 BCAS1O75363 584 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms