RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PLD6Q8N2A8 252 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 LFNGQ8NES3 379 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR51G2Q8NGK0 314 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ARRDC3Q96B67 414 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SGTBQ96EQ0 304 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CDCA5Q96FF9 252 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF486Q96H40 463 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SEC22CQ9BRL7 303 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PTDSS2Q9BVG9 487 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR14J1Q9UGF5 321 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 POLLQ9UGP5 575 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SCML2Q9UQR0 700 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 POLHQ9Y253 713 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ASB4Q9Y574 426 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF860A6NHJ4 632 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SULT2B1O00204 365 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SULT1C4O75897 302 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 YIF1AO95070 293 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SBK2P0C263 348 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ID4P47928 161 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SOX2P48431 317 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RPL26P61254 145 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 COTL1Q14019 142 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 Q3ZCU0 254 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TRIM61Q5EBN2 209 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NDUFAF5Q5TEU4 345 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CDC20BQ86Y33 519 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TEX26Q8N6G2 289 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR4A4PQ8NGN8 299 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR1S2Q8NGQ3 325 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR2T11Q8NH01 316 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 GGHQ92820 318 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF583Q96ND8 569 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MED18Q9BUE0 208 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ST6GALNAC5Q9BVH7 336 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AAMDCQ9H7C9 122 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 C8orf33Q9H7E9 229 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 LIN7BQ9HAP6 207 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 UBQLN4Q9NRR5 601 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF785A8K8V0 405 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NTSR2O95665 410 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 IL5P05113 134 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CHRM4P08173 479 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RAB5AP20339 215 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RTP1P59025 263 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PLAURQ03405 335 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 IKZF1Q13422 519 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 DAG1Q14118 895 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PCGF3Q3KNV8 242 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 METTL2BQ6P1Q9 378 aaKnown RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CATSPERGQ6ZRH7 1159 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SLC22A16Q86VW1 577 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 WDR5BQ86VZ2 330 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MFSD9Q8NBP5 474 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 THAP3Q8WTV1 239 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TSGA13Q96PP4 275 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CTPS2Q9NRF8 586 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MTCH1Q9NZJ7 389 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OSGIN2Q9Y236 505 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF443Q9Y2A4 671 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TIMM22Q9Y584 194 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PRICKLE3O43900 615 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SLC22A5O76082 557 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 TOXO94900 526 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AADACP22760 399 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AGTR2P50052 363 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ERVK-25P63136 954 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CDK5Q00535 292 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RPE65Q16518 533 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CYBRD1Q53TN4 286 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 WDR74Q6RFH5 385 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NPNTQ6UXI9 565 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR1J1Q8NGS3 322 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR5AK3PQ8NH89 298 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF417Q8TAU3 575 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 AGAP11Q8TF27 550 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF317Q96PQ6 595 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 BARHL1Q9BZE3 327 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 PITHD1Q9GZP4 211 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SALL4Q9UJQ4 1053 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SMCHD1A6NHR9 2005 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 A0A0B4J203 849 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR51F1A6NGY5 319 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SHOX2O60902 331 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SNNO75324 88 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 RFPL3O75679 317 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 MT-ND4LP03901 98 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 DNAJB1P25685 340 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 NAA10P41227 235 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 HK3P52790 923 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 LSAMPQ13449 338 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 ARL13AQ5H913 290 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 OR5M10Q6IEU7 315 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 FAM43BQ6ZT52 329 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-212ENST00000636194 CSNK1A1LQ8N752 337 aa5.68□□□□□ -1.5
SCN1A-212ENST00000636194 SCCPDHQ8NBX0 429 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms