RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 CARD18P57730 90 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 SESN3P58005 492 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 COPZ1P61923 177 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 SLC25A53Q5H9E4 307 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF311Q5JNZ3 666 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 GTF2IRD2BQ6EKJ0 949 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 REEP3Q6NUK4 255 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 GRINAQ7Z429 371 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 GTF2IRD2Q86UP8 949 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 LIX1LQ8IVB5 337 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 MSRB3Q8IXL7 192 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 CNEP1R1Q8N9A8 125 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 PCYOX1LQ8NBM8 494 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 FNDC9Q8TBE3 224 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 SLC25A43Q8WUT9 341 aaPredicted RBP15.31■□□□□ 0.04
LIN28B-202ENST00000635857 FIG4Q92562 907 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 MAL2Q969L2 176 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 CPNE4Q96A23 557 aaPredicted RBP15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF845Q96IR2 970 aaPredicted RBP15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF317Q96PQ6 595 aaPredicted RBP15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF607Q96SK3 696 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 CGREF1Q99674 301 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 NPAS1Q99742 590 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 SH3GL1Q99961 368 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 FAM107BQ9H098 131 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 PIGMQ9H3S5 423 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ACER3Q9NUN7 267 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 DNAJB12Q9NXW2 375 aaKnown RBP15.31■□□□□ 0.04
LIN28B-202ENST00000635857 ANGPT4Q9Y264 503 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 KIAA1549Q9HCM3 1950 aa15.31■□□□□ 0.04
LIN28B-202ENST00000635857 CFAP73A6NFT4 308 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CLDN24A6NM45 220 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 C19orf84I3L1E1 186 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 ADAMDEC1O15204 470 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SLC22A2O15244 555 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 TGM6O95932 706 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 ARAFP10398 606 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 GPX2P18283 190 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 IDH2P48735 452 aaKnown RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 AGFG1P52594 562 aaKnown RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CTBP2P56545 445 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CDK6Q00534 326 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 KLF10Q13118 480 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CYLC2Q14093 348 aaPredicted RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SCARB2Q14108 478 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 TRMT5Q32P41 509 aaKnown RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 TMEM176BQ3YBM2 270 aaPredicted RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 RUNDC3AQ59EK9 446 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 COQ5Q5HYK3 327 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 RNF220Q5VTB9 566 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 PLXDC2Q6UX71 529 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF836Q6ZNA1 936 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 PLEKHM3Q6ZWE6 761 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SETXQ7Z333 2677 aaKnown RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 ZNF550Q7Z398 422 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CPLX4Q7Z7G2 160 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 VRK2Q86Y07 508 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 RELL2Q8NC24 303 aaPredicted RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 NFKBIDQ8NI38 313 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 C10orf82Q8WW14 230 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 OSTF1Q92882 214 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 ANKRD27Q96NW4 1050 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SPOCK3Q9BQ16 436 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 KLHDC3Q9BQ90 382 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 CPPED1Q9BRF8 314 aaPredicted RBP15.3■□□□□ 0.04
LIN28B-202ENST00000635857 BCL2L10Q9HD36 194 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SAR1AQ9NR31 198 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 SLC13A4Q9UKG4 626 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 PACSIN3Q9UKS6 424 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 EMC9Q9Y3B6 208 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 GMEB1Q9Y692 573 aa15.3■□□□□ 0.04
LIN28B-202ENST00000635857 HEATR5AQ86XA9 2040 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 TRBV5-3A0A0A0MS03 114 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 A0A0J9YW62 118 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 ETV2O00321 342 aaPredicted RBP15.29■□□□□ 0.04
LIN28B-202ENST00000635857 MRASO14807 208 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 DNAJA2O60884 412 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 SERPINB7O75635 380 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 PGM3O95394 542 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 TFPIP10646 304 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 ETS2P15036 469 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 IL11P20809 199 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 FKBP2P26885 142 aaKnown RBP15.29■□□□□ 0.04
LIN28B-202ENST00000635857 MTPNP58546 118 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 TFF3Q07654 80 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 DLEU7Q6UYE1 221 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 GDF7Q7Z4P5 450 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 SPATA21Q7Z572 469 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 RETREG3Q86VR2 466 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 KIF18BQ86Y91 864 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 C11orf65Q8NCR3 313 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 RNASE6Q93091 150 aaKnown RBP15.29■□□□□ 0.04
LIN28B-202ENST00000635857 ADGRG7Q96K78 797 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 SPATA9Q9BWV2 254 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 TMEM38AQ9H6F2 299 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 RNF122Q9H9V4 155 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 GLRX2Q9NS18 164 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 GID8Q9NWU2 228 aa15.29■□□□□ 0.04
LIN28B-202ENST00000635857 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms