RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 HNRNPCL2B2RXH8 293 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 HNRNPCL3B7ZW38 293 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 SYT5O00445 386 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 HNRNPCL1O60812 293 aaKnown RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 HNRNPCL4P0DMR1 293 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 HOXB9P17482 250 aaPredicted RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 IGFBP2P18065 325 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 CARD18P57730 90 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 SIRPAP78324 504 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 MYBPHQ13203 477 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 CTU2Q2VPK5 515 aaKnown RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 TMEM176BQ3YBM2 270 aaPredicted RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 FBXL19-AS1Q494R0 122 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 RPS26P11Q5JNZ5 115 aaPredicted RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 MRPL2Q5T653 305 aaKnown RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 DHDDSQ86SQ9 333 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 LUZP2Q86TE4 346 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 MSRB3Q8IXL7 192 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 TSPEARQ8WU66 669 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 CNOT9Q92600 299 aaKnown RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 ARMC7Q9H6L4 198 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 RNF122Q9H9V4 155 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 A4GALTQ9NPC4 353 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 ACER3Q9NUN7 267 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 ZNF232Q9UNY5 417 aa18.73■□□□□ 0.59
SF1-221ENST00000633899 SPIN1Q9Y657 262 aaPredicted RBP18.73■□□□□ 0.59
SF1-221ENST00000633899 DNAJA2O60884 412 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 BCAS1O75363 584 aaPredicted RBP18.72■□□□□ 0.59
SF1-221ENST00000633899 SMNDC1O75940 238 aaKnown RBP eCLIP18.72■□□□□ 0.59
SF1-221ENST00000633899 NTN1O95631 604 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 NUDT7P0C024 238 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 BMP2P12643 396 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 SSTR2P30874 369 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 MAPK11Q15759 364 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 VRK2Q86Y07 508 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 KIF18BQ86Y91 864 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 ZNF440Q8IYI8 595 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 ACBD4Q8NC06 268 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 BBS10Q8TAM1 723 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 OSTF1Q92882 214 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 MAL2Q969L2 176 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 CPNE4Q96A23 557 aaPredicted RBP18.72■□□□□ 0.59
SF1-221ENST00000633899 RBM24Q9BX46 236 aaKnown RBP18.72■□□□□ 0.59
SF1-221ENST00000633899 TRIM8Q9BZR9 551 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 DNAJB12Q9NXW2 375 aaKnown RBP18.72■□□□□ 0.59
SF1-221ENST00000633899 KLHL14Q9P2G3 628 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 ZNF443Q9Y2A4 671 aaPredicted RBP18.72■□□□□ 0.59
SF1-221ENST00000633899 ADGRG4Q8IZF6 3080 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 DSPPQ9NZW4 1301 aa18.72■□□□□ 0.59
SF1-221ENST00000633899 ETV2O00321 342 aaPredicted RBP18.71■□□□□ 0.59
SF1-221ENST00000633899 EFNA2O43921 213 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 AQP8O94778 261 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 THBS1P07996 1170 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 PABPC4LP0CB38 370 aaKnown RBP18.71■□□□□ 0.59
SF1-221ENST00000633899 PRF1P14222 555 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 CD1EP15812 388 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 SHC1P29353 583 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 APOBEC1P41238 236 aaKnown RBP18.71■□□□□ 0.59
SF1-221ENST00000633899 IDH2P48735 452 aaKnown RBP18.71■□□□□ 0.59
SF1-221ENST00000633899 CTBP2P56545 445 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 NFYCQ13952 458 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 ZSWIM7Q19AV6 140 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 PRAMEF8Q5VWM4 474 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 PRAMEF7Q5VXH5 474 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 GTF2IRD2BQ6EKJ0 949 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 CGB2Q6NT52 195 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 ZNF836Q6ZNA1 936 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 PLEKHM3Q6ZWE6 761 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 GRINAQ7Z429 371 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 GTF2IRD2Q86UP8 949 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 ZNF559Q9BR84 538 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 IFT52Q9Y366 437 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 EMC9Q9Y3B6 208 aa18.71■□□□□ 0.59
SF1-221ENST00000633899 TRBV5-3A0A0A0MS03 114 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 CFAP73A6NFT4 308 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 TNFSF13O75888 250 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 ARAFP10398 606 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 CPOXP36551 454 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 KIR2DL3P43628 341 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 HTR3AP46098 478 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 DLX5P56178 289 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 MAPRE2Q15555 327 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 MMEL1Q495T6 779 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 ZNF311Q5JNZ3 666 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 DPP10Q8N608 796 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 NFKBIDQ8NI38 313 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 SLC25A43Q8WUT9 341 aaPredicted RBP18.7■□□□□ 0.58
SF1-221ENST00000633899 ZNF524Q96C55 264 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 C14orf79Q96F83 325 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 GMPPAQ96IJ6 420 aaPredicted RBP18.7■□□□□ 0.58
SF1-221ENST00000633899 OR5B2Q96R09 309 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 BCL2L10Q9HD36 194 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 JKAMPQ9P055 326 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 KCNN3Q9UGI6 736 aa18.7■□□□□ 0.58
SF1-221ENST00000633899 CDHR4A6H8M9 788 aa18.69■□□□□ 0.58
SF1-221ENST00000633899 AP3D1O14617 1153 aa18.69■□□□□ 0.58
SF1-221ENST00000633899 MSTNO14793 375 aa18.69■□□□□ 0.58
SF1-221ENST00000633899 TFPIP10646 304 aa18.69■□□□□ 0.58
SF1-221ENST00000633899 COPZ1P61923 177 aa18.69■□□□□ 0.58
SF1-221ENST00000633899 CDK6Q00534 326 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms