RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 LDLRAD1Q5T700 205 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PRAMEF20Q5VT98 475 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 FAM57BQ71RH2 274 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 VRK2Q86Y07 508 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PNPLA1Q8N8W4 532 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 TRUB1Q8WWH5 349 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 RSPRY1Q96DX4 576 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 EDARQ9UNE0 448 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 AQP9O43315 295 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 SIGLEC6O43699 453 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CAMK2DQ13557 499 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 OR1Q1Q15612 314 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF789Q5FWF6 425 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 SULF2Q8IWU5 870 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 AGBL5Q8NDL9 886 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 HCFC2Q9Y5Z7 792 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 SUSD5O60279 629 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 COL2A1P02458 1487 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 IL2RGP31785 369 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 HTD2P86397 168 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CD163Q86VB7 1156 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CCDC32Q9BV29 185 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 NME4O00746 187 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 AKAIN1P0CW23 69 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 FAM78AQ5JUQ0 283 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
SHPRH-211ENST00000629427 RANBP10Q6VN20 620 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 NDNFQ8TB73 568 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 LHPPQ9H008 270 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 RPH3ALQ9UNE2 315 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 NUMBLQ9Y6R0 609 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
SHPRH-211ENST00000629427 BLACEA4D250 179 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 F5H5P2 479 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CLN5O75503 358 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 TUSC2O75896 110 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 TFP02787 698 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 MAOAP21397 527 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CSNK1EP49674 416 aaKnown RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 FOXA1P55317 472 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 RPS18P62269 152 aaKnown RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 DCDP81605 110 aaKnown RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 CTBSQ01459 385 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 AARDQ4LEZ3 155 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PAGE3Q5JUK9 113 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 SLX4IPQ5VYV7 408 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 C15orf39Q6ZRI6 1047 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 ADIPOR2Q86V24 386 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 GPR150Q8NGU9 434 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CALHM2Q9HA72 323 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PAQR5Q9NXK6 330 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 NOSIPQ9Y314 301 aaKnown RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 SLC43A1O75387 559 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PAHP00439 452 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 HSD17B1P14061 328 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 MYF6P23409 242 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 SNRPD2P62316 118 aaKnown RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 FAM198BQ6UWH4 519 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 LINC00696Q6ZRV3 163 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CCDC28AQ8IWP9 274 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PGAP3Q96FM1 320 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 ACPTQ9BZG2 426 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 ACKR4Q9NPB9 350 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 LRP6O75581 1613 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 C5P01031 1676 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CENPBD1B2RD01 187 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CCR7P32248 378 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 SSR4P51571 173 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 POU3F1Q03052 451 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 GPR18Q14330 331 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF529Q6P280 563 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM71Q6P5X7 295 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 OPN5Q6U736 354 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 GPR155Q7Z3F1 870 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 CBARPQ8N350 705 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 CPXM2Q8N436 756 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 TEX10Q9NXF1 929 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 WIF1Q9Y5W5 379 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 GJB3O75712 270 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 LIPCP11150 499 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 SIRPAP78324 504 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 DMWDQ09019 674 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PROX2Q3B8N5 592 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 GTDC1Q4AE62 458 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM31Q5JXX7 168 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 PTCRAQ6ISU1 281 aaPredicted RBP11□□□□□ -0.65
SHPRH-211ENST00000629427 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 ADAMTS19Q8TE59 1207 aa11□□□□□ -0.65
SHPRH-211ENST00000629427 KCNK5O95279 499 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms