RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 ZIM2Q9NZV7 527 aa9.62□□□□□ -0.87
CHD2-217ENST00000629136 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
CHD2-217ENST00000629136 USH1CQ9Y6N9 552 aa9.62□□□□□ -0.87
CHD2-217ENST00000629136 ABCA4P78363 2273 aa9.62□□□□□ -0.87
CHD2-217ENST00000629136 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 GJE1A6NN92 205 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 DEFB108AA8MXU0 73 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 SLC22A3O75751 556 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 ATE1O95260 518 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 IL6P05231 212 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 CD1EP15812 388 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 PGCP20142 388 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 KLK2P20151 261 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 RPS4Y1P22090 263 aaKnown RBP9.61□□□□□ -0.87
CHD2-217ENST00000629136 CRYGSP22914 178 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 KCNJ5P48544 419 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 CTBP2P56545 445 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 CARD18P57730 90 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 SESN3P58005 492 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 HPCAP84074 193 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 MAPK11Q15759 364 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 EXOC3L2Q2M3D2 409 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 TMEM176BQ3YBM2 270 aaPredicted RBP9.61□□□□□ -0.87
CHD2-217ENST00000629136 GTDC1Q4AE62 458 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 EPGNQ6UW88 154 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 ZNF621Q6ZSS3 439 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 EIF3MQ7L2H7 374 aaKnown RBP9.61□□□□□ -0.87
CHD2-217ENST00000629136 ANKFN1Q8N957 763 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 ATP6V1C2Q8NEY4 427 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 VPS33AQ96AX1 596 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 C7orf26Q96N11 449 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 ZBTB18Q99592 522 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 FOXC2Q99958 501 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 SLCO1B3Q9NPD5 702 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 GLRX2Q9NS18 164 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 C6orf203Q9P0P8 240 aaPredicted RBP9.61□□□□□ -0.87
CHD2-217ENST00000629136 KLHL13Q9P2N7 655 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 SLC35A3Q9Y2D2 325 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 ITPR3Q14573 2671 aa9.61□□□□□ -0.87
CHD2-217ENST00000629136 DSPPQ9NZW4 1301 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 C16orf97H3BN30 126 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 RFXANKO14593 260 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 SMAD9O15198 467 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 UBDO15205 165 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 DIAPH2O60879 1101 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 RAF1P04049 648 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 HOXB9P17482 250 aaPredicted RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 ENPP1P22413 925 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 DNASE1P24855 282 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 LOXP28300 417 aaPredicted RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 MRPL19P49406 292 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 KCNJ10P78508 379 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 TXNL4AP83876 142 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 RNPS1Q15287 305 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 STAC2Q6ZMT1 411 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 LRRC74BQ6ZQY2 392 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 MSANTD1Q6ZTZ1 278 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 PLEKHM3Q6ZWE6 761 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 FCRLAQ7L513 359 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 NUFIP2Q7Z417 695 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 TUSC5Q8IXB3 177 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 TRNT1Q96Q11 434 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 ALPK1Q96QP1 1244 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 EBF4Q9BQW3 602 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 SLC39A3Q9BRY0 314 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 MED18Q9BUE0 208 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 CCDC106Q9BWC9 280 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 KLHL4Q9C0H6 718 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 TIGARQ9NQ88 270 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 EXOSC3Q9NQT5 275 aaKnown RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 CTPS2Q9NRF8 586 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 ACER3Q9NUN7 267 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 ING1Q9UK53 422 aaPredicted RBP9.6□□□□□ -0.87
CHD2-217ENST00000629136 LIPT1Q9Y234 373 aa9.6□□□□□ -0.87
CHD2-217ENST00000629136 PRR14LQ5THK1 2151 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 UQCRHLA0A096LP55 91 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 AGAP5A6NIR3 686 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 AP3D1O14617 1153 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 CASKO14936 926 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 GCM2O75603 506 aaPredicted RBP9.59□□□□□ -0.87
CHD2-217ENST00000629136 THBDP07204 575 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 PABPC4LP0CB38 370 aaKnown RBP9.59□□□□□ -0.87
CHD2-217ENST00000629136 ZCCHC18P0CG32 403 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 ETFAP13804 333 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 SLC7A1P30825 629 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 RYKP34925 604 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 POLR2JP52435 117 aaKnown RBP9.59□□□□□ -0.87
CHD2-217ENST00000629136 RAC3P60763 192 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 MERTKQ12866 999 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 SYT14P1Q58G82 188 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 GTF2IRD2BQ6EKJ0 949 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 ABLIM2Q6H8Q1 611 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 TFAP2EQ6VUC0 442 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 BEND4Q6ZU67 534 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 GTF2IRD2Q86UP8 949 aa9.59□□□□□ -0.87
CHD2-217ENST00000629136 MIER2Q8N344 545 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms