RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TAS2R43P59537 309 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ACTC1P68032 377 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ACTA1P68133 377 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 IFITM2Q01629 132 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNF85Q03923 595 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 POU4F2Q12837 409 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 HBMQ6B0K9 141 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ARHGAP11AQ6P4F7 1023 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 LSRQ86X29 649 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 CMIPQ8IY22 773 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 Q8N402 240 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 DUSP18Q8NEJ0 188 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OR4C6Q8NH72 309 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 HMGB4Q8WW32 186 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 GAS2L1Q99501 681 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 ORAI3Q9BRQ5 295 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 TMEM43Q9BTV4 400 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 NDC1Q9BTX1 674 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 MYO9BQ13459 2157 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 A0A0B4J293 547 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 SRPX2O60687 465 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 CTNSO60931 367 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 HK1P19367 917 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 SLC6A6P31641 620 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 THBS2P35442 1172 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 NUDT1P36639 197 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 NR4A2P43354 598 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 CRMP1Q14194 572 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 GGTLC2Q14390 218 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 GAS6Q14393 721 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 P2RY14Q15391 338 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ULK3Q6PHR2 472 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 NPSR1Q6W5P4 371 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 TAF8Q7Z7C8 310 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OAFQ86UD1 273 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 MCATQ8IVS2 390 aaKnown RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNF595Q8IYB9 648 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 TEX19Q8NA77 164 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OR10H4Q8NGA5 316 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ADAMTS18Q8TE60 1221 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 GRHL3Q8TE85 626 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 RIT1Q92963 219 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 NACC2Q96BF6 587 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OTULINQ96BN8 352 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 RNF31Q96EP0 1072 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 PGLYRP3Q96LB9 341 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNF578Q96N58 590 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNF285Q96NJ3 590 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 PTCHD1Q96NR3 888 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 SNX18Q96RF0 628 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OR2B2Q9GZK3 357 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 MMP28Q9H239 520 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 PPIL3Q9H2H8 161 aaKnown RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 RNF121Q9H920 327 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ERVMER34-1Q9H9K5 563 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 CHRNA9Q9UGM1 479 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ADAM30Q9UKF2 790 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 E9PI62 339 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 PPP1R3DO95685 299 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 KRT8P05787 483 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 THEGLP0DJG4 465 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 RNH1P13489 461 aaKnown RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 HOXD12P35452 270 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 GPR3P46089 330 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 NKX2-5P52952 324 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 COL19A1Q14993 1142 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 KLHL12Q53G59 568 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 ALG10BQ5I7T1 473 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 DMKNQ6E0U4 476 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 ZNF550Q7Z398 422 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 TPRA1Q86W33 373 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 SLC44A3Q8N4M1 653 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 OR4N2Q8NGD1 307 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 OR51A7Q8NH64 312 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 TNFRSF13CQ96RJ3 184 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 CYSLTR2Q9NS75 346 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 RBFOX1Q9NWB1 397 aaKnown RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 DTX4Q9Y2E6 619 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 N6AMT1Q9Y5N5 214 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 EFCAB7A8K855 629 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 A8MU76 341 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 HRKO00198 91 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 PRAMEF2O60811 474 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 REM1O75628 298 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 IFNGP01579 166 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 CHRNB1P11230 501 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 HLA-DMAP28067 261 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 MLLT3P42568 568 aaPredicted RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 MAP2K3P46734 347 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 PSMD4P55036 377 aaKnown RBP8.68□□□□□ -1.02
PDPN-212ENST00000621990 SKP1P63208 163 aa8.68□□□□□ -1.02
PDPN-212ENST00000621990 FAM53BQ14153 422 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms