RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TNFAIP8L2Q6P589 184 aaPredicted RBP21.36■■□□□ 1.01
ATXN3-253ENST00000621269 PRSS57Q6UWY2 283 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 GABRG1Q8N1C3 465 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 OIT3Q8WWZ8 545 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 RAB8BQ92930 207 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 S100PBPQ96BU1 408 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 ZBTB9Q96C00 473 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 SMR3AQ99954 134 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 QRSL1Q9H0R6 528 aaKnown RBP21.36■■□□□ 1.01
ATXN3-253ENST00000621269 MEAF6Q9HAF1 191 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 POLE3Q9NRF9 147 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 PNPOQ9NVS9 261 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 WDR45Q9Y484 360 aa21.36■■□□□ 1.01
ATXN3-253ENST00000621269 CENPVL1A0A0U1RR11 272 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 ANKRD28O15084 1053 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 DNAJA2O60884 412 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 GCM2O75603 506 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-253ENST00000621269 GUSBP08236 651 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 HOXB4P17483 251 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-253ENST00000621269 KHKP50053 298 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SESN3P58005 492 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 PHC1P78364 1004 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 MERTKQ12866 999 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 CASP8Q14790 479 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SPANXN4Q5MJ08 99 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SFRP5Q5T4F7 317 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 HHATQ5VTY9 493 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SAXO2Q658L1 398 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 YTHDF3Q7Z739 585 aaKnown RBP21.35■■□□□ 1.01
ATXN3-253ENST00000621269 ROPN1LQ96C74 230 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SLC35A5Q9BS91 424 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 MARCOQ9UEW3 520 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-253ENST00000621269 SLC35A3Q9Y2D2 325 aa21.35■■□□□ 1.01
ATXN3-253ENST00000621269 E9PBE3 544 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 KIAA0513O60268 411 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 ADAP00813 363 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 HPCAP84074 193 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 RASGEF1BQ0VAM2 473 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 BST1Q10588 318 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 P2RY6Q15077 328 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 MAPK14Q16539 360 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 FAM174BQ3ZCQ3 159 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 TNFAIP8L3Q5GJ75 292 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 TYW3Q6IPR3 259 aaKnown RBP21.34■■□□□ 1.01
ATXN3-253ENST00000621269 ZNF563Q8TA94 476 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 TMEM171Q8WVE6 324 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 KISS1RQ969F8 398 aaPredicted RBP21.34■■□□□ 1.01
ATXN3-253ENST00000621269 NEURL3Q96EH8 262 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 Q96MF0 132 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 PSD2Q9BQI7 771 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 BCO1Q9HAY6 547 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 ACER3Q9NUN7 267 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 RAB21Q9UL25 225 aa21.34■■□□□ 1.01
ATXN3-253ENST00000621269 FAM171A2A8MVW0 826 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 H6PDO95479 791 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 PLAUP00749 431 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 PGM1P36871 562 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 NME5P56597 212 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 CSNK2A1P68400 391 aaPredicted RBP21.33■■□□□ 1.01
ATXN3-253ENST00000621269 TSC22D1Q15714 1073 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 GPAT3Q53EU6 434 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 OGFOD2Q6N063 350 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 CLEC9AQ6UXN8 241 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 ZNF619Q8N2I2 560 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 ANKRD42Q8N9B4 389 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 HSD17B8Q92506 261 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 USB1Q9BQ65 265 aaKnown RBP21.33■■□□□ 1.01
ATXN3-253ENST00000621269 BDH2Q9BUT1 245 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 NGBQ9NPG2 151 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 BTNL2Q9UIR0 455 aa21.33■■□□□ 1.01
ATXN3-253ENST00000621269 SPIN1Q9Y657 262 aaPredicted RBP21.33■■□□□ 1.01
ATXN3-253ENST00000621269 FLNAP21333 2647 aaKnown RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 HS3ST1O14792 307 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 SMAD9O15198 467 aaKnown RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 ZNF500O60304 480 aaPredicted RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 CYTIPO60759 359 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 APOBEC1P41238 236 aaKnown RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 DIO1P49895 249 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 LTBQ06643 244 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 ITGADQ13349 1161 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 CAPRIN1Q14444 709 aaKnown RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 Q71RC1 249 aaPredicted RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 SPATA19Q7Z5L4 167 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 TRIML2Q8N7C3 387 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 SLC25A43Q8WUT9 341 aaPredicted RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 CCDC115Q96NT0 180 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 TMEM204Q9BSN7 226 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 GSX2Q9BZM3 304 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 SAP130Q9H0E3 1048 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 CXorf56Q9H5V9 222 aa21.32■■□□□ 1
ATXN3-253ENST00000621269 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.32■■□□□ 1
ATXN3-253ENST00000621269 NIPBLQ6KC79 2804 aaeCLIP21.31■■□□□ 1
ATXN3-253ENST00000621269 C9JVG2 144 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 SULT2B1O00204 365 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 TFPIP10646 304 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 RYKP34925 604 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 OR3A2P47893 321 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 PTH2RP49190 550 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 UFM1P61960 85 aa21.31■■□□□ 1
ATXN3-253ENST00000621269 FUT5Q11128 374 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms