RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SRFP11831 508 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 CD34P28906 385 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SLC35A1P78382 337 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 FOXQ1Q9C009 403 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 B3GNT3Q9Y2A9 372 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 LINC01565O15544 149 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ALOX12BO75342 701 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 EDN3P14138 238 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 DPP4P27487 766 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 DLSTP36957 453 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 KCNJ10P78508 379 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 GPLD1P80108 840 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 CAMK2DQ13557 499 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 PDE7AQ13946 482 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 EXT1Q16394 746 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 MRPL2Q5T653 305 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SLC22A10Q63ZE4 541 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 FAM217AQ8IXS0 508 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 OR1J2Q8NGS2 313 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ARNT2Q9HBZ2 717 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 OR2S2Q9NQN1 319 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 MGAT4CQ9UBM8 478 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TESQ9UGI8 421 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 A0A1B0GX78 115 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 UTS2O95399 124 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ATP1B3P54709 279 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 GK3PQ14409 553 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SYPL1Q16563 259 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TSPYL5Q86VY4 417 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SYNPOQ8N3V7 929 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 IL1F10Q8WWZ1 152 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF566Q969W8 418 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 S100PBPQ96BU1 408 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ZC3HAV1LQ96H79 300 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ZC3H10Q96K80 434 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SLC25A18Q9H1K4 315 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 MYH8P13535 1937 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 KLKB1P03952 638 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 IMPA1P29218 277 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 CYB561P49447 251 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 HBMQ6B0K9 141 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 BORAQ6PGQ7 559 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 CNTN4Q8IWV2 1026 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 DTWD1Q8N5C7 304 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 EPHX3Q9H6B9 360 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SLC6A20Q9NP91 592 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 MBNL1Q9NR56 388 aaKnown RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 GMEB1Q9Y692 573 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TIAM2Q8IVF5 1701 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SNAPC5O75971 98 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 GYPBP06028 91 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 COL28A1Q2UY09 1125 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 MKXQ8IYA7 352 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF420Q8TAQ5 688 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF417Q8TAU3 575 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 LCORQ96JN0 433 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 HAO2Q9NYQ3 351 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 MMACHCQ9Y4U1 282 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 ST14Q9Y5Y6 855 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 A8MV72 311 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 MAP2K3P46734 347 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 HAVCR2Q8TDQ0 301 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 OR52D1Q9H346 318 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 CLMPQ9H6B4 373 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 ACSS1Q9NUB1 689 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 F13BP05160 661 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SERPINA2P20848 420 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 MAOAP21397 527 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 GPX3P22352 226 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 PTH2RP49190 550 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SFRP4Q6FHJ7 346 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 ADAMTS16Q8TE57 1224 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 SAP130Q9H0E3 1048 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 C12orf49Q9H741 205 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TRIM64CA6NLI5 447 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 C2CD4DB7Z1M9 353 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 HHLA1C9JL84 531 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 F5H0A9 414 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-219ENST00000620786 CYB5BO43169 146 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 HCRTR1O43613 425 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 AP1G1O43747 822 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 WNT11O96014 354 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 TACR3P29371 465 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 CXCR4P61073 352 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 NTRK2Q16620 822 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 GPR157Q5UAW9 335 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 GPR139Q6DWJ6 353 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 BEST3Q8N1M1 668 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
CLIP1-219ENST00000620786 COG8Q96MW5 612 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms