RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 TNFAIP8L2Q6P589 184 aaPredicted RBP21.36■■□□□ 1.01
ATXN3-252ENST00000620536 PRSS57Q6UWY2 283 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 GABRG1Q8N1C3 465 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 OIT3Q8WWZ8 545 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 RAB8BQ92930 207 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 S100PBPQ96BU1 408 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 ZBTB9Q96C00 473 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 SMR3AQ99954 134 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 QRSL1Q9H0R6 528 aaKnown RBP21.36■■□□□ 1.01
ATXN3-252ENST00000620536 MEAF6Q9HAF1 191 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 POLE3Q9NRF9 147 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 PNPOQ9NVS9 261 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 WDR45Q9Y484 360 aa21.36■■□□□ 1.01
ATXN3-252ENST00000620536 CENPVL1A0A0U1RR11 272 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 ANKRD28O15084 1053 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 DNAJA2O60884 412 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 GCM2O75603 506 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-252ENST00000620536 GUSBP08236 651 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 HOXB4P17483 251 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-252ENST00000620536 KHKP50053 298 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SESN3P58005 492 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 PHC1P78364 1004 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 MERTKQ12866 999 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 CASP8Q14790 479 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SPANXN4Q5MJ08 99 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SFRP5Q5T4F7 317 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 HHATQ5VTY9 493 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SAXO2Q658L1 398 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 YTHDF3Q7Z739 585 aaKnown RBP21.35■■□□□ 1.01
ATXN3-252ENST00000620536 ROPN1LQ96C74 230 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SLC35A5Q9BS91 424 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 MARCOQ9UEW3 520 aaPredicted RBP21.35■■□□□ 1.01
ATXN3-252ENST00000620536 SLC35A3Q9Y2D2 325 aa21.35■■□□□ 1.01
ATXN3-252ENST00000620536 E9PBE3 544 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 KIAA0513O60268 411 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 ADAP00813 363 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 HPCAP84074 193 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 RASGEF1BQ0VAM2 473 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 BST1Q10588 318 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 P2RY6Q15077 328 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 MAPK14Q16539 360 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 FAM174BQ3ZCQ3 159 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 TNFAIP8L3Q5GJ75 292 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 TYW3Q6IPR3 259 aaKnown RBP21.34■■□□□ 1.01
ATXN3-252ENST00000620536 ZNF563Q8TA94 476 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 TMEM171Q8WVE6 324 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 KISS1RQ969F8 398 aaPredicted RBP21.34■■□□□ 1.01
ATXN3-252ENST00000620536 NEURL3Q96EH8 262 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 Q96MF0 132 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 PSD2Q9BQI7 771 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 BCO1Q9HAY6 547 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 ACER3Q9NUN7 267 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 RAB21Q9UL25 225 aa21.34■■□□□ 1.01
ATXN3-252ENST00000620536 FAM171A2A8MVW0 826 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 H6PDO95479 791 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 PLAUP00749 431 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 PGM1P36871 562 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 NME5P56597 212 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 CSNK2A1P68400 391 aaPredicted RBP21.33■■□□□ 1.01
ATXN3-252ENST00000620536 TSC22D1Q15714 1073 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 GPAT3Q53EU6 434 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 OGFOD2Q6N063 350 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 CLEC9AQ6UXN8 241 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 ZNF619Q8N2I2 560 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 ANKRD42Q8N9B4 389 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 HSD17B8Q92506 261 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 USB1Q9BQ65 265 aaKnown RBP21.33■■□□□ 1.01
ATXN3-252ENST00000620536 BDH2Q9BUT1 245 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 NGBQ9NPG2 151 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 BTNL2Q9UIR0 455 aa21.33■■□□□ 1.01
ATXN3-252ENST00000620536 SPIN1Q9Y657 262 aaPredicted RBP21.33■■□□□ 1.01
ATXN3-252ENST00000620536 FLNAP21333 2647 aaKnown RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 HS3ST1O14792 307 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 SMAD9O15198 467 aaKnown RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 ZNF500O60304 480 aaPredicted RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 CYTIPO60759 359 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 APOBEC1P41238 236 aaKnown RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 DIO1P49895 249 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 LTBQ06643 244 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 ITGADQ13349 1161 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 CAPRIN1Q14444 709 aaKnown RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 Q71RC1 249 aaPredicted RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 SPATA19Q7Z5L4 167 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 TRIML2Q8N7C3 387 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 SLC25A43Q8WUT9 341 aaPredicted RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 CCDC115Q96NT0 180 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 TMEM204Q9BSN7 226 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 GSX2Q9BZM3 304 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 SAP130Q9H0E3 1048 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 CXorf56Q9H5V9 222 aa21.32■■□□□ 1
ATXN3-252ENST00000620536 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.32■■□□□ 1
ATXN3-252ENST00000620536 NIPBLQ6KC79 2804 aaeCLIP21.31■■□□□ 1
ATXN3-252ENST00000620536 C9JVG2 144 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 SULT2B1O00204 365 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 TFPIP10646 304 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 RYKP34925 604 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 OR3A2P47893 321 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 PTH2RP49190 550 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 UFM1P61960 85 aa21.31■■□□□ 1
ATXN3-252ENST00000620536 FUT5Q11128 374 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms