RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 UTP23Q9BRU9 249 aaKnown RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 EBPLQ9BY08 206 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 MFFQ9GZY8 342 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 RHBGQ9H310 441 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 KCNK12Q9HB15 430 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 FGF20Q9NP95 211 aaPredicted RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 ACSS1Q9NUB1 689 aaPredicted RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 ASB6Q9NWX5 421 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 TRIOBPQ9H2D6 2365 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 A0A087X0M5 115 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 A0A1B0GX30 115 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 TOX3O15405 576 aaPredicted RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 CRTAPO75718 401 aaPredicted RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 PRAMEF12O95522 483 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 FGF19O95750 216 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 C1SP09871 688 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 HSD3B1P14060 373 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 PDHA2P29803 388 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 BDKRB2P30411 391 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 MVDP53602 400 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 GAS1P54826 345 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 RPP30P78346 268 aaKnown RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 TOMM20Q15388 145 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 AKIRIN2Q53H80 203 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 NR2C2APQ86WQ0 139 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 CLECL1Q8IZS7 167 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 ZNF485Q8NCK3 441 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 HAVCR2Q8TDQ0 301 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 ZPBPQ9BS86 351 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 FUZQ9BT04 418 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 MYOZ1Q9NP98 299 aaPredicted RBP9.65□□□□□ -0.86
VPS11-207ENST00000620429 ACER3Q9NUN7 267 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 IL17CQ9P0M4 197 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 ZNF69Q9UC07 566 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 WASF3Q9UPY6 502 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 OR10H1Q9Y4A9 318 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 PRSS21Q9Y6M0 314 aa9.65□□□□□ -0.86
VPS11-207ENST00000620429 IRGMA1A4Y4 181 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CXorf65A6NEN9 183 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 KDM4EB2RXH2 506 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 LRRN3E7EW58 273 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 RDH16O75452 317 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 GASTP01350 101 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 OSMP13725 252 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 TNFRSF1BP20333 461 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 GKP32189 559 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 RPL3P39023 403 aaKnown RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 CRATP43155 626 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 RAD52P43351 418 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 PNLIPRP2P54317 469 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 WDR5P61964 334 aaKnown RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 RPS24P62847 133 aaKnown RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 DGCR2P98153 550 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 TDGQ13569 410 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 IFI44LQ53G44 452 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 SLC35D3Q5M8T2 416 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 OR2W3Q7Z3T1 314 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 FAM26EQ8N5C1 309 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ZBTB2Q8N680 514 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 THEM6Q8WUY1 208 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 OPN3Q9H1Y3 402 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 LRRN3Q9H3W5 708 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 NCOR1P1Q9H4R4 102 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 SUV39H2Q9H5I1 410 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 C2orf42Q9NWW7 574 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ZFP37Q9Y6Q3 630 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 A0A0D9SG52 128 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 KDELR3O43731 214 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 COX7A2P14406 83 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 GJA1P17302 382 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CERS1P27544 350 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CCL23P55773 120 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ZXDBP98169 803 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 NHLH2Q02577 135 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 RING1Q06587 406 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 SLC5A12Q1EHB4 618 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 XKR6Q5GH73 641 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 OR52W1Q6IF63 320 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ZNF770Q6IQ21 691 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 HEPHL1Q6MZM0 1159 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CERS6Q6ZMG9 384 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 SYT12Q8IV01 421 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 OR51Q1Q8NH59 317 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 UBTD2Q8WUN7 234 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 MAL2Q969L2 176 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 S100PBPQ96BU1 408 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CMTM7Q96FZ5 175 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 CNTNAP3BQ96NU0 1288 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 TEFMQ96QE5 360 aaKnown RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 NAA11Q9BSU3 229 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 CHST5Q9GZS9 411 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 ASB8Q9H765 288 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 TPT1P8Q9HAU6 139 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 FBXL21Q9UKT6 434 aa9.64□□□□□ -0.87
VPS11-207ENST00000620429 TMEM184BQ9Y519 407 aaPredicted RBP9.64□□□□□ -0.87
VPS11-207ENST00000620429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms