RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TMEM176BQ3YBM2 270 aaPredicted RBP19.6■□□□□ 0.73
SRRT-218ENST00000620394 AP1ARQ63HQ0 302 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 PODNL1Q6PEZ8 512 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 ZNF704Q6ZNC4 412 aaPredicted RBP19.6■□□□□ 0.73
SRRT-218ENST00000620394 FCRLAQ7L513 359 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 FAM71CQ8NEG0 241 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 PPP1R36Q96LQ0 422 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 TMEM204Q9BSN7 226 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 LAT2Q9GZY6 243 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 C12orf49Q9H741 205 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 USF3Q68DE3 2245 aa19.6■□□□□ 0.73
SRRT-218ENST00000620394 KIAA0513O60268 411 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 UGT2B17O75795 530 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 IFNA2P01563 188 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 PHC1P78364 1004 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 TNK1Q13470 666 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 CAPRIN1Q14444 709 aaKnown RBP19.59■□□□□ 0.73
SRRT-218ENST00000620394 DPY19L1Q2PZI1 675 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 TMEM201Q5SNT2 666 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 HMBOX1Q6NT76 420 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 C3orf33Q6P1S2 294 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 PHC2Q8IXK0 858 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 CLEC4FQ8N1N0 589 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 SLC43A2Q8N370 569 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 TMCO5AQ8N6Q1 288 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 OR4A15Q8NGL6 344 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 ST8SIA1Q92185 356 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 TACO1Q9BSH4 297 aaKnown RBP19.59■□□□□ 0.73
SRRT-218ENST00000620394 DPY30Q9C005 99 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 BCO1Q9HAY6 547 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 MXRA5Q9NR99 2828 aa19.59■□□□□ 0.73
SRRT-218ENST00000620394 CR1P17927 2039 aa19.58■□□□□ 0.73
SRRT-218ENST00000620394 PRSS51A0A1B0GVH4 220 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 FCMRO60667 390 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 SLC1A6P48664 564 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 CCR4P51679 360 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 RAC3P60763 192 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 VEZF1Q14119 521 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 MPP2Q14168 576 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 GPR68Q15743 365 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 ETFDHQ16134 617 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 OGFOD2Q6N063 350 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 NUFIP2Q7Z417 695 aaKnown RBP19.58■□□□□ 0.72
SRRT-218ENST00000620394 TUSC5Q8IXB3 177 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 ZNF611Q8N823 705 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 PARD6BQ9BYG5 372 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 OR51I1Q9H343 314 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 MEAF6Q9HAF1 191 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 POLE3Q9NRF9 147 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 EXD2Q9NVH0 621 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 ING1Q9UK53 422 aaPredicted RBP19.58■□□□□ 0.72
SRRT-218ENST00000620394 RAB21Q9UL25 225 aa19.58■□□□□ 0.72
SRRT-218ENST00000620394 HS3ST1O14792 307 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 PRKD3O94806 890 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 AGR2O95994 175 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 BGNP21810 368 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 UQCRC2P22695 453 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 SLC7A1P30825 629 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
SRRT-218ENST00000620394 FUT5Q11128 374 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 CASP8Q14790 479 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 ANXA8L1Q5VT79 327 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 SAXO2Q658L1 398 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 C16orf62Q7Z3J2 963 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 STEAP2Q8NFT2 490 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 RFWD2Q8NHY2 731 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 PSD2Q9BQI7 771 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 HDHD5Q9BXW7 423 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 SAP130Q9H0E3 1048 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 MKLN1Q9UL63 735 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 PCDHGB4Q9UN71 923 aa19.57■□□□□ 0.72
SRRT-218ENST00000620394 H6PDO95479 791 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 CSTAP01040 98 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 TP53P04637 393 aaPredicted RBP19.56■□□□□ 0.72
SRRT-218ENST00000620394 YES1P07947 543 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 LBPP18428 481 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 ENPP1P22413 925 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 TIGD2Q4W5G0 525 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 SPANXN4Q5MJ08 99 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 TYW3Q6IPR3 259 aaKnown RBP19.56■□□□□ 0.72
SRRT-218ENST00000620394 OLIG3Q7RTU3 272 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 ANKRD46Q86W74 232 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 WFDC8Q8IUA0 241 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 TMEM158Q8WZ71 300 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 S100PBPQ96BU1 408 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 NEURL3Q96EH8 262 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 PLPPR2Q96GM1 343 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 THUMPD3Q9BV44 507 aaKnown RBP19.56■□□□□ 0.72
SRRT-218ENST00000620394 NUF2Q9BZD4 464 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 KLHL9Q9P2J3 617 aa19.56■□□□□ 0.72
SRRT-218ENST00000620394 A0A1W2PNR3 127 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 RNF223E7ERA6 249 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 E9PBE3 544 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 SMAD9O15198 467 aaKnown RBP19.55■□□□□ 0.72
SRRT-218ENST00000620394 TLX2O43763 284 aaPredicted RBP19.55■□□□□ 0.72
SRRT-218ENST00000620394 PGM1P36871 562 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 SESN3P58005 492 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 RPS4XP62701 263 aaKnown RBP19.55■□□□□ 0.72
SRRT-218ENST00000620394 MAPK14Q16539 360 aa19.55■□□□□ 0.72
SRRT-218ENST00000620394 CLEC12BQ2HXU8 276 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms