RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 NPTNQ9Y639 398 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 A0A1B0GUH1 482 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 RAB19A4D1S5 217 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 MEIS3P1A6NDR6 274 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 F5H5P2 479 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 B4GALT2O60909 372 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 SOD2P04179 222 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 UBE2IP63279 158 aaKnown RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 NDUFAF6Q330K2 333 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 THAP6Q8TBB0 222 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 SMIM4Q8WVI0 70 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 SLC16A5O15375 505 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 ECDO95905 644 aaPredicted RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 FABP1P07148 127 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 C8orf89P0DMQ9 161 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 C1GALT1C1LP0DN25 315 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 MAT2AP31153 395 aaKnown RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 AP3S2P59780 193 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 TRAM2Q15035 370 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 C2orf68Q2NKX9 166 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 PABPC1L2AQ5JQF8 200 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 KIAA1211LQ6NV74 962 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 GLDNQ6ZMI3 551 aaPredicted RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 VRK2Q86Y07 508 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 ZG16BQ96DA0 208 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 BBS4Q96RK4 519 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 C7orf50Q9BRJ6 194 aaKnown RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 PDCD10Q9BUL8 212 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 TINAGL1Q9GZM7 467 aaPredicted RBP13.53□□□□□ -0.24
SYNRG-225ENST00000619541 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
SYNRG-225ENST00000619541 PRAMEF27A3QJZ7 478 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 NOS3P29474 1203 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 RAG2P55895 527 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 DLX5P56178 289 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 RPE65Q16518 533 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.24
SYNRG-225ENST00000619541 CHST9Q7L1S5 443 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 OR6V1Q8N148 313 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 HCAR1Q9BXC0 346 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 ZCCHC2Q9C0B9 1178 aaKnown RBP13.52□□□□□ -0.24
SYNRG-225ENST00000619541 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 CHD5Q8TDI0 1954 aa13.52□□□□□ -0.24
SYNRG-225ENST00000619541 PRKRAO75569 313 aaKnown RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 MAGEB1P43366 347 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 FAM69AQ5T7M9 428 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 LRRC56Q8IYG6 542 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SLC39A11Q8N1S5 342 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SLC25A28Q96A46 364 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 OR14A2Q96R54 314 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 KLHL9Q9P2J3 617 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 NDRG3Q9UGV2 375 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SERTM1A2A2V5 107 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 CDHR4A6H8M9 788 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 TMEM200CA6NKL6 621 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 PYCARD-AS1I3L0S3 204 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 ZNF254O75437 659 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SPP1P10451 314 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 CLUP10909 449 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 EPXP11678 715 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SYN1P17600 705 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 HLA-FP30511 346 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 ART1P52961 327 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 DYRK1AQ13627 763 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 GUCA2BQ16661 112 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 TMEM69Q5SWH9 247 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 RAB12Q6IQ22 244 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 ZNF600Q6ZNG1 722 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SPAG16Q8N0X2 631 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 SLC44A3Q8N4M1 653 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 LINC00471Q8N535 108 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 OR5J2Q8NH18 312 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
SYNRG-225ENST00000619541 NPDC1Q9NQX5 325 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 AKAP7Q9P0M2 348 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 GPR55Q9Y2T6 319 aaPredicted RBP13.52□□□□□ -0.25
SYNRG-225ENST00000619541 PSMD9O00233 223 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 ATP1B1P05026 303 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 NPPBP16860 134 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 BMP7P18075 431 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 CTSOP43234 321 aaPredicted RBP13.51□□□□□ -0.25
SYNRG-225ENST00000619541 LUMP51884 338 aaPredicted RBP13.51□□□□□ -0.25
SYNRG-225ENST00000619541 EFNB1P98172 346 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 PDE7AQ13946 482 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 DCAF12L2Q5VW00 463 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 TMEM220Q6QAJ8 160 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 TPRA1Q86W33 373 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 OR8S1Q8NH09 359 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 TMEM255BQ8WV15 326 aa13.51□□□□□ -0.25
SYNRG-225ENST00000619541 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms