RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ARL4CP56559 192 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ZNF460Q14592 562 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 BEAN1Q3B7T3 259 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 APOOLQ6UXV4 268 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 POMGNT2Q8NAT1 580 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 OR4M2Q8NGB6 313 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 GPR119Q8TDV5 335 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 RAB39BQ96DA2 213 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ZHX1-C8orf76Q96EF9 292 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 LRRC37BQ96QE4 947 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 BBS4Q96RK4 519 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 BAG1Q99933 345 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 NMUR2Q9GZQ4 415 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 CDC42EP4Q9H3Q1 356 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 CA10Q9NS85 328 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 HIF1ANQ9NWT6 349 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 OPN4Q9UHM6 478 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 KLHL21Q9UJP4 597 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PCTPQ9UKL6 214 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 MALRD1Q5VYJ5 2156 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNCA-213ENST00000618500 ARID1AO14497 2285 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SONP18583 2426 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 C5orf63A6NC05 138 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 NCF1BA6NI72 391 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 SLC22A31A6NKX4 558 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 NCF1CA8MVU1 366 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 A8MXK9 166 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SUPT3HB4E1H0 165 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 UPK1AO00322 258 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 NDUFB5O43674 189 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SUPT3HO75486 399 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PRSS23O95084 383 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 KRT16P08779 473 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 NCF1P14598 390 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 PRTN3P24158 256 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SHC1P29353 583 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 VPS41P49754 854 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 BPIFB3P59826 476 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 H3F3AP84243 136 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SLC25A3Q00325 362 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 MYBPC1Q00872 1141 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 TEKQ02763 1124 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 FXNQ16595 210 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ELFN2Q5R3F8 820 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ACSM5Q6NUN0 579 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 C1orf229Q6ZS94 237 aaPredicted RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 CMIPQ8IY22 773 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ZNF100Q8IYN0 542 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ZNF619Q8N2I2 560 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 FAM71CQ8NEG0 241 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 OR4N2Q8NGD1 307 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 OR5M1Q8NGP8 315 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 CDKL2Q92772 493 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 PPP1R14AQ96A00 147 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 NXNL1Q96CM4 212 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 GIMAP5Q96F15 307 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 MS4A4EQ96PG1 132 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 CDK15Q96Q40 435 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SLC6A7Q99884 636 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 IPPKQ9H8X2 491 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 EXOSC3Q9NQT5 275 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 DUSP22Q9NRW4 184 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ACER3Q9NUN7 267 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 SLC17A6Q9P2U8 582 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 TESQ9UGI8 421 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 MTO1Q9Y2Z2 717 aaKnown RBP3.96□□□□□ -1.78
SNCA-213ENST00000618500 ANGPTL3Q9Y5C1 460 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 AKAP6Q13023 2319 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 ABCA1O95477 2261 aa3.96□□□□□ -1.78
SNCA-213ENST00000618500 JMJD1CQ15652 2540 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 A6NJY4 79 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 UBXN8O00124 270 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 SCDO00767 359 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 NPR2P20594 1047 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 TIA1P31483 386 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNCA-213ENST00000618500 SPRP35270 261 aaPredicted RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 NAAAQ02083 359 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 DLG1Q12959 904 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 CBFBQ13951 182 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 PCGF3Q3KNV8 242 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 TECRLQ5HYJ1 363 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 OR5M10Q6IEU7 315 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 FAM71E1Q6IPT2 247 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF627Q7L945 461 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 SVOPLQ8N434 492 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 BPIFB2Q8N4F0 458 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 RNF175Q8N4F7 328 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 OR5W2Q8NH69 310 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 DOK4Q8TEW6 326 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 C16orf78Q8WTQ4 265 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 MAGOHBQ96A72 148 aaKnown RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 ZNF300Q96RE9 604 aaPredicted RBP3.95□□□□□ -1.78
SNCA-213ENST00000618500 BTBD2Q9BX70 525 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 FUT8Q9BYC5 575 aa3.95□□□□□ -1.78
SNCA-213ENST00000618500 LAT2Q9GZY6 243 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms