RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 NDRG2Q9UN36 371 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-231ENST00000616390 CACNA1CQ13936 2221 aa12.86□□□□□ -0.35
CACNA1C-231ENST00000616390 C2orf74A8MZ97 194 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HRKO00198 91 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 AKAP8O43823 692 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 RFPL3O75679 317 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 GPR75O95800 540 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HPGDP15428 266 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HTR1FP30939 366 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 AKT2P31751 481 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HCCSP53701 268 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CNIH2Q6PI25 160 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC22A18ASQ8N1D0 253 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CADM2Q8N3J6 435 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 DEFB119Q8N690 84 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 OR51L1Q8NGJ5 315 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HS6ST2Q96MM7 605 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ZNF350Q9GZX5 532 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ANKRD19PQ9H560 264 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CLCA3PQ9Y6N3 262 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 DAPL1A0PJW8 107 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 FAM25AB3EWG3 89 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 FAM25CB3EWG5 89 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 FAM25GB3EWG6 89 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 KLF4O43474 513 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HMGN1P05114 100 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 DBIP07108 87 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CTSEP14091 401 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 NID1P14543 1247 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 TBXA2RP21731 343 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 HTR3AP46098 478 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 MAT1AQ00266 395 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC3A1Q07837 685 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 PRICKLE4Q2TBC4 344 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ARL9Q6T311 187 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ZNF322Q6U7Q0 402 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 IL20RBQ6UXL0 311 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 PARGQ86W56 976 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CDK20Q8IZL9 346 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 NR4A3Q92570 626 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 CYP8B1Q9UNU6 501 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 SLCO1B1Q9Y6L6 691 aa12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-231ENST00000616390 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CDHR4A6H8M9 788 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 B4DGG1 531 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CYR61O00622 381 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 IL33O95760 270 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 TNFP01375 233 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 SELLP14151 372 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 ST6GAL1P15907 406 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 P2RX3P56373 397 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 SSTP61278 116 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 IDNKQ5T6J7 187 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 FHL5Q5TD97 284 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CDRT4Q8N9R6 151 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 BAHD1Q8TBE0 780 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 HOXD1Q9GZZ0 328 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CCDC182A6NF36 153 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 TRIM77I1YAP6 450 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 TNFSF14O43557 240 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 ADAM11O75078 769 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 SERPINI2O75830 405 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 SEMA4FO95754 770 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 HLA-DPB1P04440 258 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 GABRG2P18507 467 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 ACVR1BP36896 505 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 EMDP50402 254 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 XKRXQ6PP77 449 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 UBQLNLQ8IYU4 475 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 AP3S1Q92572 193 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 WDFY2Q96P53 400 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 ZNF649Q9BS31 505 aa12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 MEPEQ9NQ76 525 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-231ENST00000616390 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms