RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 HMX1Q9NP08 348 aaPredicted RBP12.24□□□□□ -0.45
MSH6-214ENST00000616033 CD93Q9NPY3 652 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 KLHL28Q9NXS3 571 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
MSH6-214ENST00000616033 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 PTP4A3O75365 173 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 F8A1P23610 371 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 THBS2P35442 1172 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 GXYLT1Q4G148 440 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 FGD2Q7Z6J4 655 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 OR9A2Q8NGT5 310 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 FN3KQ9H479 309 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 C11orf49Q9H6J7 331 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 GNG8Q9UK08 70 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 ASB4Q9Y574 426 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 AP1M2Q9Y6Q5 423 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 A0A1B0GVT2 93 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 POM121BA6NF01 834 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 FOXE1O00358 373 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 FLRT2O43155 660 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 MT-ND5P03915 603 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 LIPCP11150 499 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 YOD1Q5VVQ6 348 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 ZNF783Q6ZMS7 281 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 FAM83HQ6ZRV2 1179 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 BTN2A1Q7KYR7 527 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 SLITRK4Q8IW52 837 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 CMTM4Q8IZR5 234 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 POGLUT1Q8NBL1 392 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 ZDHHC1Q8WTX9 485 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 RHBGQ9H310 441 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 C20orf141Q9NUB4 165 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 EMC3Q9P0I2 261 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 MRTO4Q9UKD2 239 aaKnown RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 PCYT1BQ9Y5K3 369 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 IDSB3KWA1 339 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 TEAD1P28347 426 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 HTR1FP30939 366 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 KCNJ3P48549 501 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 ANXA11P50995 505 aaKnown RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 ZNF169Q14929 603 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 HSD17B12Q53GQ0 312 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 NUDT13Q86X67 352 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 SLC44A3Q8N4M1 653 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 OR13C2Q8NGS9 318 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 TNFAIP8L1Q8WVP5 186 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 TFGQ92734 400 aaPredicted RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 SPATA5L1Q9BVQ7 753 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 JAM3Q9BX67 310 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
MSH6-214ENST00000616033 FKBP7Q9Y680 259 aa12.23□□□□□ -0.45
MSH6-214ENST00000616033 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 NDUFS4O43181 175 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 TXNL1O43396 289 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 RP2O75695 350 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 KRT33BQ14525 404 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 CLINT1Q14677 625 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 ZNF485Q8NCK3 441 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 DNAAF1Q8NEP3 725 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 AMDHD1Q96NU7 426 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 DMRTA2Q96SC8 542 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 CMSS1Q9BQ75 279 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 AIF1LQ9BQI0 150 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 KLHL42Q9P2K6 505 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 PRELID3BQ9Y3B1 194 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 SERTM1A2A2V5 107 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 OR2W5A6NFC9 320 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 STMND1H3BQB6 276 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 NMBP08949 121 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 TIMP2P16035 220 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 BSGP35613 385 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 OMPP47874 163 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 KHKP50053 298 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 FUT5Q11128 374 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 RIN1Q13671 783 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 LINC00303Q3SY05 128 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 GAREM2Q75VX8 874 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 FAM129CQ86XR2 697 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 OR11G2Q8NGC1 345 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 ADAMTS15Q8TE58 950 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 NXPE3Q969Y0 559 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 KCTD12Q96CX2 325 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 LYSMD1Q96S90 227 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 CACYBPQ9HB71 228 aaKnown RBP12.22□□□□□ -0.45
MSH6-214ENST00000616033 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 ASB6Q9NWX5 421 aa12.22□□□□□ -0.45
MSH6-214ENST00000616033 A0A087WV48 116 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 GOSR2O14653 212 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PRICKLE3O43900 615 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 PPP1R3DO95685 299 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 CSN2P05814 226 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms