RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 MED20Q9H944 212 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 GPR160Q9UJ42 338 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 TRAPPC2LQ9UL33 140 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 NME4O00746 187 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 RAB3DO95716 219 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 BORAQ6PGQ7 559 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 PRMT8Q9NR22 394 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-212ENST00000615671 THSD1Q9NS62 852 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 PRAMEF27A3QJZ7 478 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 FAM189A1O60320 539 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 ALDOBP05062 364 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 TPOP07202 933 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 PRAMEF9Q5VWM5 478 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 ADIPOR2Q86V24 386 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 NAT6Q93015 286 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 MSI2Q96DH6 328 aaKnown RBP17.5■□□□□ 0.39
GABPB1-212ENST00000615671 ELF4Q99607 663 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-212ENST00000615671 MMP28Q9H239 520 aa17.5■□□□□ 0.39
GABPB1-212ENST00000615671 MTHFD2P13995 350 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 PM20D1Q6GTS8 502 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 TMEM71Q6P5X7 295 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 EDARQ9UNE0 448 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 IFNA10P01566 189 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 ZNF679Q8IYX0 411 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 OR8J2Q8NGG1 315 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 GPR148Q8TDV2 347 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 VRK1Q99986 396 aaPredicted RBP17.49■□□□□ 0.39
GABPB1-212ENST00000615671 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
GABPB1-212ENST00000615671 SDC1P18827 310 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 TMBIM6P55061 237 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 IGHV3-20A0A0C4DH32 117 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 EDN1P05305 212 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 FCGR2AP12318 317 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 TAS2R20P59543 309 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 DCDP81605 110 aaKnown RBP17.49■□□□□ 0.39
GABPB1-212ENST00000615671 IKZF1Q13422 519 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 CTSL3PQ5NE16 218 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 SBSNQ6UWP8 590 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 MKXQ8IYA7 352 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 MICU1Q9BPX6 476 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 LHPPQ9H008 270 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 TMEM269A0A1B0GVZ9 245 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 ARPC5O15511 151 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 SLC22A5O76082 557 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 CLEC3BP05452 202 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 F3P13726 295 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 FECHP22830 423 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 SLC5A2P31639 672 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 TLDC1Q6P9B6 456 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 RFLNAQ6ZTI6 216 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 SLC35D2Q76EJ3 337 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 DEFB123Q8N688 67 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 GFOD1Q9NXC2 390 aa17.49■□□□□ 0.39
GABPB1-212ENST00000615671 RNASET2O00584 256 aaKnown RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 MT-ND4P03905 459 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 CPMP14384 443 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 PDE7AQ13946 482 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 MLF2Q15773 248 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 RBM12BQ8IXT5 1001 aaKnown RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 RGRP47804 291 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 LTB4RQ15722 352 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 OR5D18Q8NGL1 313 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 OR11L1Q8NGX0 322 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 LIN37Q96GY3 246 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 NGBQ9NPG2 151 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 HSF5Q4G112 596 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 GTPBP8Q8N3Z3 284 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 ESX1Q8N693 406 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 BTBD2Q9BX70 525 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 ELOVL3Q9HB03 270 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 ZNF337Q9Y3M9 751 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 SYPL1Q16563 259 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 ZNF687Q8N1G0 1237 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 TCTN2Q96GX1 697 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 SAP130Q9H0E3 1048 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 CDCP1Q9H5V8 836 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 EGLN3Q9H6Z9 239 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 PTBP2Q9UKA9 531 aaKnown RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 EMC9Q9Y3B6 208 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 GAAP10253 952 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 HTR3AP46098 478 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 AFF3P51826 1226 aaKnown RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 CDONQ4KMG0 1287 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 WBP2NLQ6ICG8 309 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 FAM160A2Q8N612 972 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 CHDHQ8NE62 594 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 WDR83Q9BRX9 315 aaKnown RBP17.48■□□□□ 0.39
GABPB1-212ENST00000615671 IL17CQ9P0M4 197 aa17.48■□□□□ 0.39
GABPB1-212ENST00000615671 IGHV3-64DA0A0J9YX35 117 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 FAM166BA8MTA8 275 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 ZNF736B4DX44 427 aaPredicted RBP17.47■□□□□ 0.39
GABPB1-212ENST00000615671 G3V2L1 256 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 HOXD9P28356 352 aaPredicted RBP17.47■□□□□ 0.39
GABPB1-212ENST00000615671 ALDH3B2P48448 385 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 EDDM3BP56851 147 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 MGAT3Q09327 533 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 BEX5Q5H9J7 111 aa17.47■□□□□ 0.39
GABPB1-212ENST00000615671 MS4A15Q8N5U1 240 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms