RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 SPANXN4Q5MJ08 99 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 SAXO2Q658L1 398 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 C3orf33Q6P1S2 294 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
PRKN-211ENST00000615065 CIARTQ8N365 385 aaPredicted RBP13.17□□□□□ -0.3
PRKN-211ENST00000615065 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 STEAP2Q8NFT2 490 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 XAGE5Q8WWM1 108 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 TESCQ96BS2 214 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 OR5B2Q96R09 309 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 EXD2Q9NVH0 621 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 PNPOQ9NVS9 261 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 HAO1Q9UJM8 370 aa13.17□□□□□ -0.3
PRKN-211ENST00000615065 ING1Q9UK53 422 aaPredicted RBP13.17□□□□□ -0.3
PRKN-211ENST00000615065 H7C1Q1 480 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 HS3ST1O14792 307 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
PRKN-211ENST00000615065 ADAP00813 363 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 C1QCP02747 245 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 LBPP18428 481 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 PTH2RP49190 550 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 NME5P56597 212 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 STX3Q13277 289 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 CASP8Q14790 479 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 FAM174BQ3ZCQ3 159 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 SFRP5Q5T4F7 317 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 ATAD3BQ5T9A4 648 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 ANXA8L1Q5VT79 327 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 TYW3Q6IPR3 259 aaKnown RBP13.16□□□□□ -0.3
PRKN-211ENST00000615065 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 FRRS1Q6ZNA5 592 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 EIF3MQ7L2H7 374 aaKnown RBP13.16□□□□□ -0.3
PRKN-211ENST00000615065 HMGN2P46Q86SG4 172 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 ZNF619Q8N2I2 560 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 FAM71CQ8NEG0 241 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 ST8SIA1Q92185 356 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 NEURL3Q96EH8 262 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 COX4I2Q96KJ9 171 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 TEX37Q96LM6 180 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 PSD2Q9BQI7 771 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 GSX2Q9BZM3 304 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 MEAF6Q9HAF1 191 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 BCO1Q9HAY6 547 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 WDR45Q9Y484 360 aa13.16□□□□□ -0.3
PRKN-211ENST00000615065 NSD1Q96L73 2696 aaPredicted RBP13.16□□□□□ -0.3
PRKN-211ENST00000615065 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 TRIM64A6NGJ6 449 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 TRIM64BA6NI03 449 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 C9JVG2 144 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 E9PBE3 544 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 CYTIPO60759 359 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 SNUPNO95149 360 aaKnown RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 ALDOCP09972 364 aaKnown RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 PGCP20142 388 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 IL32P24001 234 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 EDNRAP25101 427 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 CHI3L1P36222 383 aaPredicted RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 PGM1P36871 562 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 KHKP50053 298 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 CLNS1AP54105 237 aaKnown RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 BST1Q10588 318 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 MERTKQ12866 999 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 TAB1Q15750 504 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 DPY19L1Q2PZI1 675 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRKN-211ENST00000615065 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 ROPN1LQ96C74 230 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 PAIP2Q9BPZ3 127 aaKnown RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 SLC35A5Q9BS91 424 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 HDHD5Q9BXW7 423 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 ACER3Q9NUN7 267 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 MARCOQ9UEW3 520 aaPredicted RBP13.15□□□□□ -0.3
PRKN-211ENST00000615065 PRSS50Q9UI38 385 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 RAB21Q9UL25 225 aa13.15□□□□□ -0.3
PRKN-211ENST00000615065 CLDN24A6NM45 220 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 SDHDO14521 159 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
PRKN-211ENST00000615065 LY6G6DO95868 133 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 AGR2O95994 175 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 FESP07332 822 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 GUSBP08236 651 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 S100A3P33764 101 aa13.14□□□□□ -0.31
PRKN-211ENST00000615065 OR3A2P47893 321 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms