RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 OLIG3Q7RTU3 272 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 ZNF619Q8N2I2 560 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 FAM71CQ8NEG0 241 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 MGARPQ8TDB4 240 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 PIGTQ969N2 578 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 TEX37Q96LM6 180 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 PANX1Q96RD7 426 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 ZBTB18Q99592 522 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 PIP5K1AQ99755 562 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 ACTR6Q9GZN1 396 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 SAP130Q9H0E3 1048 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 SERINC1Q9NRX5 453 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 KLHL9Q9P2J3 617 aa20.26■□□□□ 0.83
FAM228B-208ENST00000613899 SLCO1B7G3V0H7 640 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 PGRP06401 933 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 EPHA3P29320 983 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 NME5P56597 212 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 FUT5Q11128 374 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 GPAT3Q53EU6 434 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 AP1ARQ63HQ0 302 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 TFAP2EQ6VUC0 442 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 FRRS1Q6ZNA5 592 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 C22orf34Q6ZV56 151 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 TUSC5Q8IXB3 177 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 ZNF524Q96C55 264 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 HS3ST6Q96QI5 342 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 UBTD1Q9HAC8 227 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 NKIRAS1Q9NYS0 192 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 ACANP16112 2415 aa20.25■□□□□ 0.83
FAM228B-208ENST00000613899 RAI1Q7Z5J4 1906 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 A0A1W2PNR3 127 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 THBDP07204 575 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 YES1P07947 543 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 FOSL1P15407 271 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 HOXC12P31275 282 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 PGM1P36871 562 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 NR1H2P55055 460 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 SESN3P58005 492 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 MERTKQ12866 999 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 MAPK14Q16539 360 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 ACKR1Q16570 336 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 C20orf204Q6ZNR8 217 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 CXorf67Q86X51 503 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 GLB1L3Q8NCI6 653 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 STEAP2Q8NFT2 490 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 SLC25A43Q8WUT9 341 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 OR5B2Q96R09 309 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 OR52E6Q96RD3 313 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 QRSL1Q9H0R6 528 aaKnown RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 WDR55Q9H6Y2 383 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 ACER3Q9NUN7 267 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 GPR45Q9Y5Y3 372 aa20.24■□□□□ 0.83
FAM228B-208ENST00000613899 SPIN1Q9Y657 262 aaPredicted RBP20.24■□□□□ 0.83
FAM228B-208ENST00000613899 GOLGA8QA0A0J9YX86 632 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 GOLGA8OA6NCC3 632 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 GOLGA8NF8WBI6 632 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 HMGN4O00479 90 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 KITP10721 976 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 ENPP1P22413 925 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 LOXP28300 417 aaPredicted RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 IL12AP29459 219 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 MAGOHP61326 146 aaKnown RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 SHEQ5VZ18 495 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 PLEKHM3Q6ZWE6 761 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 NUFIP2Q7Z417 695 aaKnown RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 RNF130Q86XS8 419 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 LRRC75A-AS1Q8N1F1 130 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 WFDC11Q8NEX6 87 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 ZNF563Q8TA94 476 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 CCL19Q99731 98 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 HDHD5Q9BXW7 423 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 BCO1Q9HAY6 547 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 EXOSC3Q9NQT5 275 aaKnown RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 DLL4Q9NR61 685 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.23■□□□□ 0.83
FAM228B-208ENST00000613899 LIPT1Q9Y234 373 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 ZFHX3Q15911 3703 aa20.23■□□□□ 0.83
FAM228B-208ENST00000613899 IGHV3-15A0A0B4J1V0 119 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 CCDC154A6NI56 674 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 C9JVG2 144 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 ARHGEF9O43307 516 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 SMPD2O60906 423 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 GCM2O75603 506 aaPredicted RBP20.22■□□□□ 0.83
FAM228B-208ENST00000613899 H6PDO95479 791 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 IDO1P14902 403 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 CSNK2A1P68400 391 aaPredicted RBP20.22■□□□□ 0.83
FAM228B-208ENST00000613899 NKX6-1P78426 367 aaPredicted RBP20.22■□□□□ 0.83
FAM228B-208ENST00000613899 SYT14P1Q58G82 188 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 NXNQ6DKJ4 435 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 GABRG1Q8N1C3 465 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 TRNT1Q96Q11 434 aaKnown RBP20.22■□□□□ 0.83
FAM228B-208ENST00000613899 PSD2Q9BQI7 771 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 MANSC1Q9H8J5 431 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 DSCAMO60469 2012 aa20.22■□□□□ 0.83
FAM228B-208ENST00000613899 FREM1Q5H8C1 2179 aa20.21■□□□□ 0.83
FAM228B-208ENST00000613899 VPS13CQ709C8 3753 aa20.21■□□□□ 0.83
FAM228B-208ENST00000613899 KLF4O43474 513 aa20.21■□□□□ 0.83
FAM228B-208ENST00000613899 CYTIPO60759 359 aa20.21■□□□□ 0.83
FAM228B-208ENST00000613899 APOBEC1P41238 236 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms