RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NOS3P29474 1203 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 GABRA5P31644 462 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 RPS7P62081 194 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 ZNF181Q2M3W8 571 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 STEAP3Q658P3 488 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 ZNF321PQ8N8H1 164 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 MINDY2Q8NBR6 621 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 OR4C6Q8NH72 309 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 SPRYD4Q8WW59 207 aaPredicted RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 ZNF649Q9BS31 505 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 OR51V1Q9H2C8 321 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 LANCL2Q9NS86 450 aa12.54□□□□□ -0.4
NEK3-205ENST00000610828 SF3B6Q9Y3B4 125 aaKnown RBP12.54□□□□□ -0.4
NEK3-205ENST00000610828 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 DUX1O43812 170 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 AKAP8O43823 692 aaKnown RBP12.53□□□□□ -0.4
NEK3-205ENST00000610828 PPP1R3DO95685 299 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
NEK3-205ENST00000610828 CELP19835 753 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 CFHR1Q03591 330 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 MED25Q71SY5 747 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 CMIPQ8IY22 773 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 SLC35F3Q8IY50 421 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 SLC25A45Q8N413 288 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 GATSQ8NAP1 163 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 SLC37A3Q8NCC5 494 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 PTPMT1Q8WUK0 201 aaPredicted RBP12.53□□□□□ -0.4
NEK3-205ENST00000610828 TSLPQ969D9 159 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 TBX5Q99593 518 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 CAB39Q9Y376 341 aaPredicted RBP12.53□□□□□ -0.4
NEK3-205ENST00000610828 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 UNC13CQ8NB66 2214 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 SEC16AO15027 2179 aa12.53□□□□□ -0.4
NEK3-205ENST00000610828 A0A1B0GVT2 93 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 C12orf71A8MTZ7 269 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 H3BMH7 237 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 IL1AP01583 271 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 TNFSF8P32971 234 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 GALNSP34059 522 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SDC2P34741 201 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 ETV6P41212 452 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SLC9A3P48764 834 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 COPZ1P61923 177 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 FABP5Q01469 135 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 CSTF1Q05048 431 aaKnown RBP12.52□□□□□ -0.4
NEK3-205ENST00000610828 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.4
NEK3-205ENST00000610828 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 RTL4Q6ZR62 310 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 KLBQ86Z14 1044 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 ACBD7Q8N6N7 88 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SYT14Q8NB59 555 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 CYB561A3Q8NBI2 242 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 OR52N1Q8NH53 320 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 DNASE2BQ8WZ79 361 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 PTP4A1Q93096 173 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SLC35B4Q969S0 331 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SLC25A46Q96AG3 418 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SLC30A2Q9BRI3 323 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 TMED9Q9BVK6 235 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 SIAEQ9HAT2 523 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 ZNF229Q9UJW7 825 aa12.52□□□□□ -0.4
NEK3-205ENST00000610828 TP53BP1Q12888 1972 aaPredicted RBP12.52□□□□□ -0.4
NEK3-205ENST00000610828 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 SMIM30A4D0T7 59 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 ISPDA4D126 451 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 J3QRE1 110 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 POLR1CO15160 346 aaPredicted RBP12.52□□□□□ -0.41
NEK3-205ENST00000610828 REM1O75628 298 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 MSL3P1P0C860 447 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 HPGDP15428 266 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 ZNF3P17036 446 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 CXCL12P48061 93 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 SLC37A1P57057 533 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 HNRNPA0Q13151 305 aaKnown RBP12.52□□□□□ -0.41
NEK3-205ENST00000610828 BIKQ13323 160 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
NEK3-205ENST00000610828 QSOX2Q6ZRP7 698 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 TMEM151BQ8IW70 566 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 GPR135Q8IZ08 494 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 POC5Q8NA72 575 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 OR1L3Q8NH93 324 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 ISG20L2Q9H9L3 353 aaKnown RBP12.52□□□□□ -0.41
NEK3-205ENST00000610828 MCCC2Q9HCC0 563 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.41
NEK3-205ENST00000610828 SLC35A3Q9Y2D2 325 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 GSTK1Q9Y2Q3 226 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 CLCA3PQ9Y6N3 262 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 HEATR5AQ86XA9 2040 aa12.52□□□□□ -0.41
NEK3-205ENST00000610828 CABIN1Q9Y6J0 2220 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 SLC22A31A6NKX4 558 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms