RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 EGFP01133 1207 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 IL1AP01583 271 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 MALLQ13021 153 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 LYSMD4Q5XG99 296 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 RHOXF1Q8NHV9 184 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 TCTN2Q96GX1 697 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 FOXN4Q96NZ1 517 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 TMEM38AQ9H6F2 299 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 OPN1LWP04000 364 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 ELAVL4P26378 380 aaKnown RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 NR4A2P43354 598 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 CDK10Q15131 360 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 MTFR2Q6P444 385 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 ZNF611Q8N823 705 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 MED20Q9H944 212 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 A4GALTQ9NPC4 353 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 GFYI3L273 518 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 I6L893 689 aaPredicted RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 SLC16A6O15403 523 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 F13BP05160 661 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 RPS5P46782 204 aaKnown RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 RSU1Q15404 277 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 KCNN3Q9UGI6 736 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 PTRH2Q9Y3E5 179 aaKnown RBP13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 BLACEA4D250 179 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 A6NLC8 198 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 GJE1A6NN92 205 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 SULT2B1O00204 365 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 ZP2Q05996 745 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 ILKQ13418 452 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 SFXN2Q96NB2 322 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 ASB16Q96NS5 453 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 AMBRA1Q9C0C7 1298 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 EVA1AQ9H8M9 152 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 TAS2R3Q9NYW6 316 aa13.3□□□□□ -0.28
PCDHB16-201ENST00000609684 F5H5K5 113 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 B4GALT3O60512 393 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SBK3P0C264 359 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 CAV3P56539 151 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SLC48A1Q6P1K1 146 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 BEND4Q6ZU67 534 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 LRRC56Q8IYG6 542 aaPredicted RBP13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 OR6T1Q8NGN1 323 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 ITFG2Q969R8 447 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 HIF3AQ9Y2N7 669 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 GABRPO00591 440 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 MPIG6BO95866 241 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 CD34P28906 385 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SELENOVP59797 346 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 METRNLQ641Q3 311 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 RNF113BQ8IZP6 322 aaKnown RBP13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 KCNS2Q9ULS6 477 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SLC6A5Q9Y345 797 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 AQP9O43315 295 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 FOLR3P41439 243 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SLC6A19Q695T7 634 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 PDXPQ96GD0 296 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 PRRT4C9JH25 899 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 PKLRP30613 574 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 P2RY14Q15391 338 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 CDK5RAP2Q96SN8 1893 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 C1QTNF3Q9BXJ4 246 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 ZDHHC5Q9C0B5 715 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 FGF22Q9HCT0 170 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 V9GY05 133 aa13.29□□□□□ -0.28
PCDHB16-201ENST00000609684 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 A6NCN8 305 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 GGT3PA6NGU5 568 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 LCATP04180 440 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 GNMTQ14749 295 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 NR0B2Q15466 257 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 MBOAT2Q6ZWT7 520 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 ADIPOR2Q86V24 386 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 OR5H2Q8NGV7 314 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 MSANTD3Q96H12 275 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 GLS2Q9UI32 602 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 ARID1BQ8NFD5 2236 aaPredicted RBP13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 BORCS7-ASMTA0A0B4J1R7 106 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 ZNF264O43296 627 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 AGTR1P30556 359 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 OPRD1P41143 372 aa13.28□□□□□ -0.28
PCDHB16-201ENST00000609684 HTR2BP41595 481 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms