RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TRIM77I1YAP6 450 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 FCMRO60667 390 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 ADH1AP07327 375 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 HOXD4P09016 255 aaPredicted RBP20.73■□□□□ 0.91
SHANK2-220ENST00000608988 ANKRD34CP0C6C1 535 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 ZNF3P17036 446 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 RAP2BP61225 183 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 TSPAN5P62079 268 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 MRPS10P82664 201 aaKnown RBP20.73■□□□□ 0.91
SHANK2-220ENST00000608988 CRYZQ08257 329 aaKnown RBP20.73■□□□□ 0.91
SHANK2-220ENST00000608988 MS4A3Q96HJ5 214 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 UTP23Q9BRU9 249 aaKnown RBP20.73■□□□□ 0.91
SHANK2-220ENST00000608988 MRI1Q9BV20 369 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 TRMT61BQ9BVS5 477 aaKnown RBP20.73■□□□□ 0.91
SHANK2-220ENST00000608988 CD93Q9NPY3 652 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 SLC27A6Q9Y2P4 619 aa20.73■□□□□ 0.91
SHANK2-220ENST00000608988 TBC1D3EA0A087X179 549 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 CCL16O15467 120 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 CFDP00746 253 aaPredicted RBP20.72■□□□□ 0.91
SHANK2-220ENST00000608988 C8orf89P0DMQ9 161 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 MAKP20794 623 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 STXBP1P61764 594 aaKnown RBP20.72■□□□□ 0.91
SHANK2-220ENST00000608988 TJAP1Q5JTD0 557 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 C18orf63Q68DL7 685 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 FAM198BQ6UWH4 519 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 SMIM19Q96E16 107 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 FERD3LQ96RJ6 166 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 MRPS30Q9NP92 439 aaKnown RBP20.72■□□□□ 0.91
SHANK2-220ENST00000608988 KCMF1Q9P0J7 381 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 FBXL21Q9UKT6 434 aa20.72■□□□□ 0.91
SHANK2-220ENST00000608988 MRPS7Q9Y2R9 242 aaKnown RBP20.72■□□□□ 0.91
SHANK2-220ENST00000608988 C4orf51C9J302 202 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 GABARAPH6UMI1 98 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 PDCD5O14737 125 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 MOSPD3O75425 235 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 TPPPO94811 219 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 LYPD3O95274 346 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 IFNGP01579 166 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 HPXP02790 462 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 ATP1B1P05026 303 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 IL5P05113 134 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 DBIP07108 87 aaKnown RBP20.71■□□□□ 0.91
SHANK2-220ENST00000608988 SYPP08247 313 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 CLTBP09497 229 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 NAT1P18440 290 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 RPS4Y1P22090 263 aaKnown RBP20.71■□□□□ 0.91
SHANK2-220ENST00000608988 PTGER1P34995 402 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 ACVR1BP36896 505 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 SELENOPP49908 381 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 METAP1P53582 386 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 OR12D2P58182 307 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 TCTE1Q5JU00 501 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 OLFML2AQ68BL7 652 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 C3P1Q6ZMU1 363 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 OR11G2Q8NGC1 345 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 C15orf40Q8WUR7 153 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 ZFPM2Q8WW38 1151 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 THAP4Q8WY91 577 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 WBP1Q96G27 269 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 MRPL48Q96GC5 212 aaKnown RBP20.71■□□□□ 0.91
SHANK2-220ENST00000608988 NRTNQ99748 197 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 HRASLSQ9HDD0 168 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 NRIP3Q9NQ35 241 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 CLDND1Q9NY35 253 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 WNT6Q9Y6F9 365 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 PLSCR5A0PG75 271 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 ZNF879B4DU55 563 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 KRBOX1C9JBD0 128 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 TFP02787 698 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 INHAP05111 366 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 ELAVL3Q14576 367 aaKnown RBP20.71■□□□□ 0.91
SHANK2-220ENST00000608988 HNRNPA1L2Q32P51 320 aaKnown RBP20.71■□□□□ 0.91
SHANK2-220ENST00000608988 UNQ9370/PRO34162Q6UXP9 181 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 BEST4Q8NFU0 473 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 OR4C6Q8NH72 309 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 PMM1Q92871 262 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 RAB7BQ96AH8 199 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 TCEAL4Q96EI5 215 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 C14orf105Q9NVL8 296 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 HCN3Q9P1Z3 774 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 SIGLEC7Q9Y286 467 aa20.71■□□□□ 0.91
SHANK2-220ENST00000608988 DENND4AQ7Z401 1863 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 MFSD2BA6NFX1 497 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 SNRPGP15A8MWD9 76 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 IFNA16P05015 189 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 ACSM4P0C7M7 580 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 IFNGR1P15260 489 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 MAT2AP31153 395 aaKnown RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 PYCR1P32322 319 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 MECP2P51608 486 aaKnown RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 RPL6Q02878 288 aaKnown RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 ILF3Q12906 894 aaKnown RBP eCLIP20.7■□□□□ 0.92e-7■■□□□ 14.4
SHANK2-220ENST00000608988 CDK5R1Q15078 307 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 ZSWIM7Q19AV6 140 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 B3GNTL1Q67FW5 361 aaPredicted RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 RPL22L1Q6P5R6 122 aaKnown RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 KIAA1324Q6UXG2 1013 aaKnown RBP20.7■□□□□ 0.9
SHANK2-220ENST00000608988 NUDT18Q6ZVK8 323 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 OVCH2Q7RTZ1 564 aa20.7■□□□□ 0.9
SHANK2-220ENST00000608988 POMGNT2Q8NAT1 580 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms