RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 WFIKKN1Q96NZ8 548 aa10.98□□□□□ -0.65
CTSA-210ENST00000606000 TCF7L2Q9NQB0 619 aa10.98□□□□□ -0.65
CTSA-210ENST00000606000 POLE3Q9NRF9 147 aa10.98□□□□□ -0.65
CTSA-210ENST00000606000 C6orf203Q9P0P8 240 aaPredicted RBP10.98□□□□□ -0.65
CTSA-210ENST00000606000 STOML1Q9UBI4 398 aa10.98□□□□□ -0.65
CTSA-210ENST00000606000 PLEKHA6Q9Y2H5 1048 aa10.98□□□□□ -0.65
CTSA-210ENST00000606000 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 FAM234BA2RU67 622 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 AGAP5A6NIR3 686 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 HMGB1P1B2RPK0 211 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 ETV2O00321 342 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 POLR3GO15318 223 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 ANP32DO95626 131 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 HRGP04196 525 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 BCHEP06276 602 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 GUSBP08236 651 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 NUDT7P0C024 238 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 NR2F1P10589 423 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 HOXB9P17482 250 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 RPS4Y1P22090 263 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 UGT2B10P36537 528 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 CRATP43155 626 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 IST1P53990 364 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 CTBP2P56545 445 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 EEF1A1P68104 462 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 KCNJ10P78508 379 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 MERTKQ12866 999 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 C6orf10Q5SRN2 563 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 PDSS1Q5T2R2 415 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 EEF1A1P5Q5VTE0 462 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 C3orf33Q6P1S2 294 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 NUFIP2Q7Z417 695 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 FUNDC1Q8IVP5 155 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 OR6K3Q8NGY3 331 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 ZC3HAV1LQ96H79 300 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 TRNT1Q96Q11 434 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 OR5B2Q96R09 309 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 PAIP1Q9H074 479 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 VIPAS39Q9H9C1 493 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 TPT1P8Q9HAU6 139 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 CTPS2Q9NRF8 586 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 CCM2LQ9NUG4 571 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 INTS9Q9NV88 658 aaKnown RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 PAQR5Q9NXK6 330 aaPredicted RBP10.97□□□□□ -0.65
CTSA-210ENST00000606000 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 EMC9Q9Y3B6 208 aa10.97□□□□□ -0.65
CTSA-210ENST00000606000 DSPPQ9NZW4 1301 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 GJE1A6NN92 205 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 NR5A2O00482 541 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 SMAD9O15198 467 aaKnown RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 KRT75O95678 551 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 PGCP20142 388 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 CCNA2P20248 432 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 EDNRAP25101 427 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 SLC7A1P30825 629 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ART1P52961 327 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 DSTNP60981 165 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 LRRC74AQ0VAA2 488 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 TSC22D1Q15714 1073 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 AP1ARQ63HQ0 302 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ZNF836Q6ZNA1 936 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 LRRC74BQ6ZQY2 392 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 FCRLAQ7L513 359 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 VRK2Q86Y07 508 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 C10orf111Q8N326 155 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 GOLGA6L1Q8N7Z2 621 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ZNF563Q8TA94 476 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 CKAP2Q8WWK9 683 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ST8SIA1Q92185 356 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 GTF2H4Q92759 462 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 ITCHQ96J02 903 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 DACH2Q96NX9 599 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ZNF300Q96RE9 604 aaPredicted RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 CCDC106Q9BWC9 280 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 KLHL4Q9C0H6 718 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 RMND5AQ9H871 391 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 PLSCR4Q9NRQ2 329 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 ACER3Q9NUN7 267 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 RLIMQ9NVW2 624 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 SLC25A37Q9NYZ2 338 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 CCDC167Q9P0B6 97 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ST6GALNAC2Q9UJ37 374 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 ING1Q9UK53 422 aaPredicted RBP10.96□□□□□ -0.65
CTSA-210ENST00000606000 PCDHB14Q9Y5E9 798 aa10.96□□□□□ -0.65
CTSA-210ENST00000606000 OTOGQ6ZRI0 2925 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 DEFB108AA8MXU0 73 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 TFPTP0C1Z6 253 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 ZCCHC18P0CG32 403 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 IDH2P48735 452 aaKnown RBP10.95□□□□□ -0.66
CTSA-210ENST00000606000 ANXA11P50995 505 aaKnown RBP10.95□□□□□ -0.66
CTSA-210ENST00000606000 STX1BP61266 288 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 PAGE3Q5JUK9 113 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 MSANTD1Q6ZTZ1 278 aa10.95□□□□□ -0.66
CTSA-210ENST00000606000 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms