RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ELOA3DA6NLF2 546 aaPredicted RBP16.42■□□□□ 0.22
VRK3-225ENST00000601912 NTN1O95631 604 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 FPR3P25089 353 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 MSX1P28360 303 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 EPHA2P29317 976 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 CASP3P42574 277 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 CRISP1P54107 249 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 GAS1P54826 345 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 SUMO3P55854 103 aaPredicted RBP16.42■□□□□ 0.22
VRK3-225ENST00000601912 PRKCDQ05655 676 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 COL28A1Q2UY09 1125 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 ELOA3BQ3SY89 546 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 ZNF691Q5VV52 312 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 TMEM81Q6P7N7 255 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 LINC00114Q6XXX2 140 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 ELOA3Q8NG57 546 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 GATA6Q92908 595 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 SGCZQ96LD1 299 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 ZNF426Q9BUY5 554 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 REV1Q9UBZ9 1251 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 WIF1Q9Y5W5 379 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 CHCHD2Q9Y6H1 151 aaPredicted RBP16.42■□□□□ 0.22
VRK3-225ENST00000601912 HSPE1-MOB4S4R3N1 261 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 H3BN98 237 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 PIP5K1CO60331 668 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 GP1BBP13224 206 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 IFI30P13284 250 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 CHMP24386 653 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 ITGA3P26006 1051 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 POU1F1P28069 291 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 GSSP48637 474 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 BICRALQ6AI39 1079 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 SLC30A6Q6NXT4 461 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 VASH2Q86V25 355 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 PITX2Q99697 317 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 C12orf10Q9HB07 376 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 CPNE5Q9HCH3 593 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 CNIH4Q9P003 139 aa16.41■□□□□ 0.22
VRK3-225ENST00000601912 C2orf72A6NCS6 295 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 ANKUB1A6NFN9 424 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 KPNA4O00629 521 aaPredicted RBP16.4■□□□□ 0.22
VRK3-225ENST00000601912 ADAM10O14672 748 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 GPR4P46093 362 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 CTBP2P56545 445 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 RAPSNQ13702 412 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PTGES3Q15185 160 aaKnown RBP16.4■□□□□ 0.22
VRK3-225ENST00000601912 SLC22A10Q63ZE4 541 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 B3GNTL1Q67FW5 361 aaPredicted RBP16.4■□□□□ 0.22
VRK3-225ENST00000601912 OR5M10Q6IEU7 315 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 ATG4DQ86TL0 474 aaPredicted RBP16.4■□□□□ 0.22
VRK3-225ENST00000601912 GPALPP1Q8IXQ4 340 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PFN4Q8NHR9 129 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 GPR119Q8TDV5 335 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 TMEM234Q8WY98 164 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PSMF1Q92530 271 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 BPIFA2Q96DR5 249 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 GPA33Q99795 319 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 SLC19A3Q9BZV2 496 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 LHPPQ9H008 270 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 ADAM19Q9H013 955 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 STMN3Q9NZ72 180 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 ABI3Q9P2A4 366 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PCDHGB5Q9Y5G0 923 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PCSK5Q92824 1860 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 HTR3EA5X5Y0 456 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 C17orf51A8MQB3 221 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 E9PQ18 207 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 CDC40O60508 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
VRK3-225ENST00000601912 TNFAIP8O95379 198 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 SOX14O95416 240 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 LYNP07948 512 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PTNP21246 168 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 TACR3P29371 465 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 GGT2P36268 569 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 PTGDSP41222 190 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 RRADP55042 308 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 IL5RAQ01344 420 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 QPRTQ15274 297 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 TBC1D25Q3MII6 688 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 RTL4Q6ZR62 310 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 RASSF6Q6ZTQ3 369 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 MEX3DQ86XN8 651 aaKnown RBP16.4■□□□□ 0.22
VRK3-225ENST00000601912 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 TAS2R10Q9NYW0 307 aa16.4■□□□□ 0.22
VRK3-225ENST00000601912 IGLV3-32A0A0A0MS00 114 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 GNB5O14775 395 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 KLF4O43474 513 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 CXCR1P25024 350 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 HTR3AP46098 478 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 ST13P50502 369 aaKnown RBP16.39■□□□□ 0.21
VRK3-225ENST00000601912 NUP107P57740 925 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 ISL1P61371 349 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 FOXC1Q12948 553 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 TOMM34Q15785 309 aaPredicted RBP16.39■□□□□ 0.21
VRK3-225ENST00000601912 ABHD17BQ5VST6 288 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 Q6ZPB1 254 aaPredicted RBP16.39■□□□□ 0.21
VRK3-225ENST00000601912 TMPRSS11FQ6ZWK6 438 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 DEPDC4Q8N2C3 294 aa16.39■□□□□ 0.21
VRK3-225ENST00000601912 ZNF786Q8N393 782 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms