RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SWI5Q1ZZU3 235 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 UGT3A2Q3SY77 523 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 FAM120AOSQ5T036 256 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ABLIM2Q6H8Q1 611 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ZNF544Q6NX49 715 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 CDC73Q6P1J9 531 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ZYG11AQ6WRX3 759 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 RNF165Q6ZSG1 346 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 TMPPEQ6ZT21 453 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 FRMD7Q6ZUT3 714 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 IL17RELQ6ZVW7 336 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 GALNT5Q7Z7M9 940 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 MTDHQ86UE4 582 aaKnown RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 FBXL14Q8N1E6 418 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 CCNYL1Q8N7R7 359 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 COX18Q8N8Q8 333 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ZNF527Q8NB42 609 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 OR52N5Q8NH56 324 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 OR5W2Q8NH69 310 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ACMSDQ8TDX5 336 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 C1orf159Q96HA4 380 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 MS4A4EQ96PG1 132 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 TSSK3Q96PN8 268 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SDF2Q99470 211 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 CCT7Q99832 543 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SOX7Q9BT81 388 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 AMBRA1Q9C0C7 1298 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 HOXD1Q9GZZ0 328 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SHARPINQ9H0F6 387 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 QRSL1Q9H0R6 528 aaKnown RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 TSPYL1Q9H0U9 437 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 RRAGDQ9NQL2 400 aaPredicted RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 C1orf109Q9NX04 203 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SH3BP4Q9P0V3 963 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ATP6V1HQ9UI12 483 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 DTNAQ9Y4J8 743 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ARFGEF3Q5TH69 2177 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 A0A087WUV0 522 aaPredicted RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 IGHV4-61A0A0C4DH41 118 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 CENPVL1A0A0U1RR11 272 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 A0A1W2PPM1 405 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 A0A1W2PR80 420 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 C3orf80F5H4A9 247 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 H3BQF6 201 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SLC28A1O00337 649 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 LSM1O15116 133 aaKnown RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 RAD51DO75771 328 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 IGHV3-9P01782 118 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 PROCP04070 461 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 PGRP06401 933 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ABHD2P08910 425 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 DHRS4L1P0CG22 281 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 UROSP10746 265 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 LAMP1P11279 417 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 BCKDHAP12694 445 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 HPGDP15428 266 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SRD5A1P18405 259 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 CASQ1P31415 396 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 APOBEC3AP31941 199 aaPredicted RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 NR4A2P43354 598 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 CCT3P49368 545 aaKnown RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 DIO1P49895 249 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SLC16A1P53985 500 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SESN3P58005 492 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 H3F3AP84243 136 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 PLAURQ03405 335 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SKP2Q13309 424 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ZNF141Q15928 474 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ZSWIM7Q19AV6 140 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 TIGD2Q4W5G0 525 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 DCST2Q5T1A1 773 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 CLEC6AQ6EIG7 209 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 C8orf74Q6P047 294 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SLC22A25Q6T423 547 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 TMEM108Q6UXF1 575 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 SYT10Q6XYQ8 523 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 LSRQ86X29 649 aaPredicted RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 ZNF100Q8IYN0 542 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 C17orf53Q8N3J3 647 aaPredicted RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 NOA1Q8NC60 698 aaKnown RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 TOR1AIP2Q8NFQ8 470 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 OR7A2PQ8NGA2 310 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 CLHC1Q8NHS4 586 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ZFP28Q8NHY6 868 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 PPCDCQ96CD2 204 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 MTERF3Q96E29 417 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 BOD1Q96IK1 185 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ARL5BQ96KC2 179 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 FOXN4Q96NZ1 517 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 OR5B2Q96R09 309 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 FMO2Q99518 471 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 INPP5KQ9BT40 448 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 THUMPD3Q9BV44 507 aaKnown RBP5.35□□□□□ -1.55
VRK3-220ENST00000600259 C1QTNF6Q9BXI9 259 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 TXLNGYQ9BZA5 131 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 LAT2Q9GZY6 243 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 C12orf65Q9H3J6 166 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms