RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 HHATLQ9HCP6 504 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 STOML1Q9UBI4 398 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
SCAF1-203ENST00000598359 E9PBE3 544 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 CASKO14936 926 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 SLC22A2O15244 555 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 SS18L1O75177 396 aaPredicted RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 BCAS1O75363 584 aaPredicted RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 NTN1O95631 604 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 CD8BP10966 210 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 UBL4AP11441 157 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 FCGR2AP12318 317 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 CD1EP15812 388 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 PRKCAP17252 672 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 UQCRC2P22695 453 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 PRDX6P30041 224 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 S100A3P33764 101 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 UGT2B10P36537 528 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 CTBP2P56545 445 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 CARD18P57730 90 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 FUT5Q11128 374 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 MAPK14Q16539 360 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 ARHGAP11BQ3KRB8 267 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 ESPNLQ6ZVH7 1005 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 TREML1Q86YW5 311 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 XAGE5Q8WWM1 108 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 NINJ1Q92982 152 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 TESCQ96BS2 214 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 MAELQ96JY0 434 aaKnown RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 FOXC2Q99958 501 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 INPP5KQ9BT40 448 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 MED18Q9BUE0 208 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 QRSL1Q9H0R6 528 aaKnown RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 AIG1Q9NVV5 245 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 TAGLN3Q9UI15 199 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 MCTS1Q9ULC4 181 aaKnown RBP12.3□□□□□ -0.44
SCAF1-203ENST00000598359 EMC9Q9Y3B6 208 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 ACANP16112 2415 aa12.3□□□□□ -0.44
SCAF1-203ENST00000598359 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ABCA4P78363 2273 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 DUXAA6NLW8 204 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF264O43296 627 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 STX11O75558 287 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 UGT2B17O75795 530 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ATE1O95260 518 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 GSNP06396 782 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 KLK2P20151 261 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ADSLP30566 484 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 CHI3L1P36222 383 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 EIF1P41567 113 aaKnown RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 CDKN2CP42773 168 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 CLNS1AP54105 237 aaKnown RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SKP2Q13309 424 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 QPRTQ15274 297 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SAXO2Q658L1 398 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 OR5W2Q8NH69 310 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ABHD3Q8WU67 409 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ZG16BQ96DA0 208 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 PIK3IP1Q96FE7 263 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 GMPPAQ96IJ6 420 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SLC39A3Q9BRY0 314 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 SLC35A5Q9BS91 424 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 THUMPD3Q9BV44 507 aaKnown RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF350Q9GZX5 532 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 C1orf21Q9H246 121 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 CXXC4Q9H2H0 198 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF385DQ9H6B1 395 aa12.29□□□□□ -0.44
SCAF1-203ENST00000598359 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-203ENST00000598359 VPS13CQ709C8 3753 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 DEFB108AA8MXU0 73 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 SOX30O94993 753 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 CSTAP01040 98 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 RAF1P04049 648 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ELK4P28324 431 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 AGTR1P30556 359 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 KEAP1Q14145 624 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF141Q15928 474 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ZNF239Q16600 458 aaKnown RBP12.28□□□□□ -0.44
SCAF1-203ENST00000598359 SLC9B1Q4ZJI4 515 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 PDSS1Q5T2R2 415 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms