RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 RANBP3LQ86VV4 465 aaPredicted RBP20■□□□□ 0.79
CHMP2A-204ENST00000597848 GALNT11Q8NCW6 608 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 OR52E4Q8NGH9 312 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 WFDC6Q9BQY6 131 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 PRR14Q9BWN1 585 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 LRMDAQ9H2I8 198 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 RPS6KB2Q9UBS0 482 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 SVILO95425 2214 aa20■□□□□ 0.79
CHMP2A-204ENST00000597848 KALRNO60229 2985 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 OR14I1A6ND48 311 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 POU3F2P20265 443 aaPredicted RBP19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 TNFRSF1BP20333 461 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ADH6P28332 368 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 SLC1A3P43003 542 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ZNF136P52737 540 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 MRPL49Q13405 166 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 SLC25A53Q5H9E4 307 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 NHSL2Q5HYW2 709 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 CYP2R1Q6VVX0 501 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 CARM1Q86X55 608 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 DHFR2Q86XF0 187 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 LACC1Q8IV20 430 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ATP6V1C2Q8NEY4 427 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 SMPDL3BQ92485 455 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 TIMP4Q99727 224 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ZNF559Q9BR84 538 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 MUC13Q9H3R2 512 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 DCAF13Q9NV06 445 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ALKBH4Q9NXW9 302 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 ACTR3BQ9P1U1 418 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 STOML1Q9UBI4 398 aa19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 TESQ9UGI8 421 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 SAMD4AQ9UPU9 718 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-204ENST00000597848 TMEM229AB2RXF0 380 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 BCKDKO14874 412 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 WISP1O95388 367 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 TPOP07202 933 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 FREM3P0C091 2139 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 HTR3AP46098 478 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 OR1E2P47887 323 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 MS4A2Q01362 244 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 SRYQ05066 204 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 CRYZQ08257 329 aaKnown RBP19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 DCST1Q5T197 706 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 WLSQ5T9L3 541 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 PGM2L1Q6PCE3 622 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 PLEKHM3Q6ZWE6 761 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 GRINAQ7Z429 371 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 VTCN1Q7Z7D3 282 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 RBM45Q8IUH3 476 aaKnown RBP19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 CHERPQ8IWX8 916 aaKnown RBP19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 ULK2Q8IYT8 1036 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 EID3Q8N140 333 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 OR4D11Q8NGI4 311 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 OR6T1Q8NGN1 323 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 OR5M9Q8NGP3 310 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 HSH2DQ96JZ2 352 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 MCHR1Q99705 422 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 TRIM2Q9C040 744 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 TMEM185BQ9H7F4 350 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 TMEM27Q9HBJ8 222 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 SERINC1Q9NRX5 453 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 PRDM4Q9UKN5 801 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 CAMK2AQ9UQM7 478 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 ZNF407Q9C0G0 2248 aa19.98■□□□□ 0.79
CHMP2A-204ENST00000597848 BSNQ9UPA5 3926 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 HEATR5AQ86XA9 2040 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 ETV2O00321 342 aaPredicted RBP19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 PRRG2O14669 202 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 SLC19A2O60779 497 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 NTN1O95631 604 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 OPN1LWP04000 364 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 PEPDP12955 493 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 CCNA2P20248 432 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 IL11P20809 199 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 GNLYP22749 145 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 PSMA4P25789 261 aaKnown RBP19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 TACR3P29371 465 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 APOBEC1P41238 236 aaKnown RBP19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 GXYLT1Q4G148 440 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 IFI44LQ53G44 452 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 UBQLNLQ8IYU4 475 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 FAM57AQ8TBR7 257 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 RNF217Q8TC41 542 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 ASB9Q96DX5 294 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 LRGUKQ96M69 825 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 CTPS2Q9NRF8 586 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 OSGIN2Q9Y236 505 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 AP4B1Q9Y6B7 739 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 V9GYQ6 96 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 SHANK1Q9Y566 2161 aa19.97■□□□□ 0.79
CHMP2A-204ENST00000597848 PRRC2CQ9Y520 2896 aaKnown RBP19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 SEC14L5O43304 696 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 EFNA2O43921 213 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 PRKD3O94806 890 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 ATP6V1B2P21281 511 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 HTR2AP28223 471 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 ELK4P28324 431 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 LHX2P50458 406 aa19.96■□□□□ 0.79
CHMP2A-204ENST00000597848 POLR2HP52434 150 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms