RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 DUSP26Q9BV47 211 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 BHLHE41Q9C0J9 482 aaPredicted RBP9.33□□□□□ -0.92
LSM4-205ENST00000597776 BCO1Q9HAY6 547 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 NGBQ9NPG2 151 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 KLHL9Q9P2J3 617 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 LIPT1Q9Y234 373 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 FBN3Q75N90 2809 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 FREM1Q5H8C1 2179 aa9.33□□□□□ -0.92
LSM4-205ENST00000597776 RNF103-CHMP3A0A140T963 221 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 A0A1W2PP18 115 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 ETV2O00321 342 aaPredicted RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 EIF4E2O60573 245 aaKnown RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 FCMRO60667 390 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 CYTIPO60759 359 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 BCAS1O75363 584 aaPredicted RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 FESP07332 822 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 UBTFL6P0CB48 400 aaPredicted RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 CREB1P16220 341 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 PTNP21246 168 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 SESN3P58005 492 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 DMTNQ08495 405 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 RASGEF1BQ0VAM2 473 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 PGGHGQ32M88 737 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 TIGD2Q4W5G0 525 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 OR4F3Q6IEY1 312 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 C3orf33Q6P1S2 294 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 Q6ZT83 130 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 MOAP1Q96BY2 351 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 DNAJA3Q96EY1 480 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 TRMT61AQ96FX7 289 aaKnown RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 PPP1R36Q96LQ0 422 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 PRPF18Q99633 342 aaKnown RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 THUMPD3Q9BV44 507 aaKnown RBP9.32□□□□□ -0.92
LSM4-205ENST00000597776 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 TRIM2Q9C040 744 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 NMUR2Q9GZQ4 415 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 NPAP1Q9NZP6 1156 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
LSM4-205ENST00000597776 SONP18583 2426 aaKnown RBP9.31□□□□□ -0.92
LSM4-205ENST00000597776 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 CRLF1O75462 422 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 UGT2B17O75795 530 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 CSTAP01040 98 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 CD8AP01732 235 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 IGHV3-9P01782 118 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 BPGMP07738 259 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 MATN1P21941 496 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 IGHV1-2P23083 117 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 DIO1P49895 249 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 C21orf58P58505 322 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 MERTKQ12866 999 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 PPA1Q15181 289 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 ZNF141Q15928 474 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 PDCD2Q16342 344 aaPredicted RBP9.31□□□□□ -0.92
LSM4-205ENST00000597776 MAPK14Q16539 360 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 C6orf120Q7Z4R8 191 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 HMGN2P46Q86SG4 172 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 RIBC1Q8N443 379 aaPredicted RBP9.31□□□□□ -0.92
LSM4-205ENST00000597776 NATD1Q8N6N6 113 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 PKNOX2Q96KN3 472 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 SLC35G5Q96KT7 338 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 LAT2Q9GZY6 243 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 SLCO5A1Q9H2Y9 848 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 LGALS13Q9UHV8 139 aa9.31□□□□□ -0.92
LSM4-205ENST00000597776 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
LSM4-205ENST00000597776 NUP214P35658 2090 aaPredicted RBP9.3□□□□□ -0.92
LSM4-205ENST00000597776 ATRQ13535 2644 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ZNF724A8MTY0 619 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ITM2AO43736 263 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 DNAJA2O60884 412 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ADAM11O75078 769 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 STX11O75558 287 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 C1QCP02747 245 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 THBS1P07996 1170 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 NUDT17P0C025 328 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 GGT1P19440 569 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 COX5AP20674 150 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 IDUAP35475 653 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 SERPINB5P36952 375 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 CDH11P55287 796 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 CLDN8P56748 225 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 EMX2Q04743 252 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 IFFO1Q0D2I5 559 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 FUT5Q11128 374 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ETFDHQ16134 617 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ARHGAP11BQ3KRB8 267 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 SYT14P1Q58G82 188 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ABLIM2Q6H8Q1 611 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 TNFAIP8L2Q6P589 184 aaPredicted RBP9.3□□□□□ -0.92
LSM4-205ENST00000597776 BHLHB9Q6PI77 547 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 TMPPEQ6ZT21 453 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 CXXC5Q7LFL8 322 aaKnown RBP9.3□□□□□ -0.92
LSM4-205ENST00000597776 C16orf62Q7Z3J2 963 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ANKRD46Q86W74 232 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ZNF100Q8IYN0 542 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 OR4A15Q8NGL6 344 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 ST8SIA1Q92185 356 aa9.3□□□□□ -0.92
LSM4-205ENST00000597776 RAB8BQ92930 207 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms