RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ZSWIM7Q19AV6 140 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 EIF2S3LQ2VIR3 472 aaKnown RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 INTS11Q5TA45 600 aaKnown RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 ARHGAP11AQ6P4F7 1023 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 PLXDC2Q6UX71 529 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 CLEC18BQ6UXF7 455 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 LINC00114Q6XXX2 140 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 PLEKHM3Q6ZWE6 761 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 ZNF771Q7L3S4 317 aaPredicted RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 VTCN1Q7Z7D3 282 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 ZNF605Q86T29 641 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 KRT73Q86Y46 540 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 MARVELD2Q8N4S9 558 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 CLEC18CQ8NCF0 446 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 OR14L1PQ8NHC6 308 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 FAM57AQ8TBR7 257 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 ST8SIA1Q92185 356 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 FIG4Q92562 907 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 ZBTB8AQ96BR9 441 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 C7orf34Q96L11 122 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 PTGES2Q9H7Z7 377 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 DCAF13Q9NV06 445 aaKnown RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 B4GALT7Q9UBV7 327 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 OSGIN1Q9UJX0 560 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 A0A0J9YW62 118 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 OR14I1A6ND48 311 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 FFAR1O14842 300 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ARPC2O15144 300 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 NPIPB7O75200 414 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 SERPINB7O75635 380 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PDE5AO76074 875 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 TOXO94900 526 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PRSS23O95084 383 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ACTL6AO96019 429 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 OPN1LWP04000 364 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ZNF17P17021 662 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PGCP20142 388 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ATP6V1B2P21281 511 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PTGS2P35354 604 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 SLC1A3P43003 542 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 OR1E2P47887 323 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 EGR4Q05215 589 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 CBFBQ13951 182 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 TRIM25Q14258 630 aaKnown RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 BCL2A1Q16548 175 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 C1QL3Q5VWW1 255 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ENPP6Q6UWR7 440 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 NCCRP1Q6ZVX7 275 aaPredicted RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 ATG4DQ86TL0 474 aaPredicted RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 ARHGAP24Q8N264 748 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 OR5M9Q8NGP3 310 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 ABTB1Q969K4 478 aaPredicted RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 RELTQ969Z4 430 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 C3orf49Q96BT1 292 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 MRGPRX4Q96LA9 322 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 DMRTA2Q96SC8 542 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PRSS27Q9BQR3 290 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 THTPAQ9BU02 230 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 SPATA5L1Q9BVQ7 753 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 HELZ2Q9BYK8 2649 aaKnown RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 AMBRA1Q9C0C7 1298 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 HHATLQ9HCP6 504 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 NDE1Q9NXR1 346 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 TINAGQ9UJW2 476 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 DKKL1Q9UK85 242 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 PRPF19Q9UMS4 504 aaKnown RBP9.52□□□□□ -0.89
LIG1-210ENST00000596332 KIAA1549Q9HCM3 1950 aa9.52□□□□□ -0.89
LIG1-210ENST00000596332 DNAJC13O75165 2243 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 A0A1B0GWA3 101 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 ZC3H12DA2A288 527 aaKnown RBP9.51□□□□□ -0.89
LIG1-210ENST00000596332 ADAMDEC1O15204 470 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 SERPINA1P01009 418 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 RNF224P0DH78 156 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 KLK2P20151 261 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 TACR3P29371 465 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 CA7P43166 264 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 SLC6A8P48029 635 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 CCR4P51679 360 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 RAC1P63000 192 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 MXRA7P84157 204 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 TOMM20Q15388 145 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 OR1Q1Q15612 314 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 LRRC23Q53EV4 343 aaPredicted RBP9.51□□□□□ -0.89
LIG1-210ENST00000596332 RAET1LQ5VY80 246 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 LCN8Q6JVE9 175 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 POMZP3Q6PJE2 187 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 ULK2Q8IYT8 1036 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 ARL5BQ96KC2 179 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 SFXN2Q96NB2 322 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 UCN2Q96RP3 112 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 TUBA1CQ9BQE3 449 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 LRMDAQ9H2I8 198 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 LDAHQ9H6V9 325 aa9.51□□□□□ -0.89
LIG1-210ENST00000596332 COQ10BQ9H8M1 238 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms