RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SYNGR4O95473 234 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 TFPTP0C1Z6 253 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 PABPC4LP0CB38 370 aaKnown RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 BMP2P12643 396 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 SFTPDP35247 375 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 CD79BP40259 229 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 RAC3P60763 192 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 TMEM176BQ3YBM2 270 aaPredicted RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 GTF2IRD2BQ6EKJ0 949 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 CDH24Q86UP0 819 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 GTF2IRD2Q86UP8 949 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 TMEM200AQ86VY9 491 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 ZNF610Q8N9Z0 462 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 OR6K3Q8NGY3 331 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 RFWD2Q8NHY2 731 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 RNF128Q8TEB7 428 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 TMEM234Q8WY98 164 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 CPNE4Q96A23 557 aaPredicted RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 SRXN1Q9BYN0 137 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 PRRG4Q9BZD6 226 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 TIGARQ9NQ88 270 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 THUMPD1Q9NXG2 353 aaKnown RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 DNAJB12Q9NXW2 375 aaKnown RBP11.67□□□□□ -0.54
USE1-207ENST00000596136 PCDHB14Q9Y5E9 798 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 FREM1Q5H8C1 2179 aa11.67□□□□□ -0.54
USE1-207ENST00000596136 A0A096LPI6 279 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 CLDN24A6NM45 220 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 FAAHO00519 579 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 ADAM11O75078 769 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
USE1-207ENST00000596136 ANP32DO95626 131 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 NR2F1P10589 423 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 ETFAP13804 333 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 APOBEC1P41238 236 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 CCR4P51679 360 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 STX1BP61266 288 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 SIRPAP78324 504 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 HPCAP84074 193 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 RNPS1Q15287 305 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 TESK1Q15569 626 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 GTDC1Q4AE62 458 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 LRIF1Q5T3J3 769 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 C3orf33Q6P1S2 294 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 PLEKHM3Q6ZWE6 761 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 SLC38A5Q8WUX1 472 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 CNOT9Q92600 299 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 GPATCH1Q9BRR8 931 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 SLC39A3Q9BRY0 314 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 CCDC106Q9BWC9 280 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 POLDIP3Q9BY77 421 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 QRSL1Q9H0R6 528 aaKnown RBP11.66□□□□□ -0.54
USE1-207ENST00000596136 CALML5Q9NZT1 146 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 P2RX2Q9UBL9 471 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 EMC9Q9Y3B6 208 aa11.66□□□□□ -0.54
USE1-207ENST00000596136 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SH3D21A4FU49 640 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 EDF1O60869 148 aaKnown RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 CYP7B1O75881 506 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 DBIP07108 87 aaKnown RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 FKBP2P26885 142 aaKnown RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 UGT2B10P36537 528 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 CRATP43155 626 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 CTBP2P56545 445 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 DSTNP60981 165 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 RGNQ15493 299 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 C6orf10Q5SRN2 563 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 PRAMEF8Q5VWM4 474 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 PRAMEF7Q5VXH5 474 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SLC2A7Q6PXP3 512 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 DNAJC14Q6Y2X3 702 aaPredicted RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 GRINAQ7Z429 371 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 CDC20BQ86Y33 519 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SLC43A2Q8N370 569 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 ARFGAP2Q8N6H7 521 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SLC25A43Q8WUT9 341 aaPredicted RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 ROBO4Q8WZ75 1007 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SPDL1Q96EA4 605 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 AURKBQ96GD4 344 aaPredicted RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 ZNF385DQ9H6B1 395 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 NDRG3Q9UGV2 375 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 ING1Q9UK53 422 aaPredicted RBP11.65□□□□□ -0.54
USE1-207ENST00000596136 CLEC4AQ9UMR7 237 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 TESMINQ9Y4I5 508 aa11.65□□□□□ -0.54
USE1-207ENST00000596136 TRBV5-3A0A0A0MS03 114 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CDHR4A6H8M9 788 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 C16orf97H3BN30 126 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CLIC1O00299 241 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms