RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 EIF4E2O60573 245 aaKnown RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 LMX1BO60663 402 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 PLIN3O60664 434 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 GLRA3O75311 464 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 RAD51DO75771 328 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 DHRS4L1P0CG22 281 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 NEFHP12036 1026 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 BCKDHAP12694 445 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 ZNF16P17020 682 aaPredicted RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 NTF4P34130 210 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 ASMTP46597 345 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 ZNF83P51522 516 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 RPL38P63173 70 aaKnown RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 RAB35Q15286 201 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 WHAMMP3Q1A5X7 153 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 CFAP157Q5JU67 520 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 FBXW9Q5XUX1 488 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 CYB5R2Q6BCY4 276 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 C3orf33Q6P1S2 294 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 SLC22A25Q6T423 547 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 TRMT10CQ7L0Y3 403 aaKnown RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 R3HCC1LQ7Z5L2 792 aaKnown RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 ZNF100Q8IYN0 542 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 FBXL14Q8N1E6 418 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 ARIH2OSQ8N7S6 290 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 TOR1AIP2Q8NFQ8 470 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 OR52N5Q8NH56 324 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 FAM168AQ92567 244 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 PROX1Q92786 737 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 CHMP6Q96FZ7 201 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 OR5B2Q96R09 309 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 ACTRT3Q9BYD9 372 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 AMBRA1Q9C0C7 1298 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 SHARPINQ9H0F6 387 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 QRSL1Q9H0R6 528 aaKnown RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 OXSMQ9NWU1 459 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 PSMC3IPQ9P2W1 217 aaPredicted RBP8.77□□□□□ -1.01
LIG1-209ENST00000596104 TMED5Q9Y3A6 229 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 DTNAQ9Y4J8 743 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.76□□□□□ -1.019e-6■■□□□ 12.6
LIG1-209ENST00000596104 ZNF716A6NP11 495 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 AZIN1O14977 448 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 SCAMP2O15127 329 aaKnown RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 ZNF264O43296 627 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 URI1O94763 535 aaPredicted RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 LY6HO94772 140 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 IGHV3-9P01782 118 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 LINC00032P0C843 101 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 LAMP1P11279 417 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 UBL4AP11441 157 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 USF1P22415 310 aaPredicted RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 IGFBP5P24593 272 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 CCT3P49368 545 aaKnown RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 DIO1P49895 249 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 FABP6P51161 128 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 EFNA4P52798 201 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 FOXG1P55316 489 aaPredicted RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 SESN3P58005 492 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 SKP2Q13309 424 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 CBFBQ13951 182 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 PDK3Q15120 406 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 TIGD2Q4W5G0 525 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 LIPMQ5VYY2 423 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 ZNF544Q6NX49 715 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 TMPPEQ6ZT21 453 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 ZNF614Q8N883 585 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 OR7A2PQ8NGA2 310 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 OR56A1Q8NGH5 318 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 RFWD2Q8NHY2 731 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 ADAMTS15Q8TE58 950 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 OR5P2Q8WZ92 322 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 MUS81Q96NY9 551 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 INPP5KQ9BT40 448 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 TXLNGYQ9BZA5 131 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 C12orf65Q9H3J6 166 aaKnown RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 TAS2R16Q9NYV7 291 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 MALT1Q9UDY8 824 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 TBK1Q9UHD2 729 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 KCNE5Q9UJ90 142 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 POU2F3Q9UKI9 436 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 FAF1Q9UNN5 650 aaPredicted RBP8.76□□□□□ -1.01
LIG1-209ENST00000596104 DNAJC15Q9Y5T4 150 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.76□□□□□ -1.01
LIG1-209ENST00000596104 PLCE1Q9P212 2302 aa8.76□□□□□ -1.01
LIG1-209ENST00000596104 CENPVL1A0A0U1RR11 272 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 A0A1W2PR80 420 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 CIB4A0PJX0 185 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SERINC4A6NH21 518 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 VWC2LB2RUY7 222 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 PDLIM1O00151 329 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 C6orf47O95873 294 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 ITGA5P08648 1049 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 KRT16P08779 473 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 CSF3P09919 207 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 CPA3P15088 417 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 SRD5A1P18405 259 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 HPCAL1P37235 193 aa8.75□□□□□ -1.01
LIG1-209ENST00000596104 GZMKP49863 264 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms