RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FEVQ99581 238 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 RNF32Q9H0A6 362 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 ZNF552Q9H707 407 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 SMPD3Q9NY59 655 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 PPP4R1LQ9P1A2 415 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 ABI3Q9P2A4 366 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 RPS6KB2Q9UBS0 482 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 MGAT4BQ9UQ53 548 aa13.42□□□□□ -0.26
SHKBP1-211ENST00000595945 A0A087WUJ7 227 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 E9PQ18 207 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 SNPHO15079 494 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 KLF4O43474 513 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 TRIM3O75382 744 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 NEURL1O76050 574 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 WDPCPO95876 746 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 ADAP00813 363 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 GASTP01350 101 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 IGFBP5P24593 272 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 EIF2S3P41091 472 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 UGT2B15P54855 530 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 MFAP5Q13361 173 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 DEFB109BQ30KR1 87 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 RFX4Q33E94 735 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 PRAMEF20Q5VT98 475 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 AGAP7PQ5VUJ5 663 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 C1orf94Q6P1W5 598 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 CD300LDQ6UXZ3 194 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 MBOAT2Q6ZWT7 520 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 ZER1Q7Z7L7 766 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 RNF113BQ8IZP6 322 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 TMEM41AQ96HV5 264 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 HS6ST2Q96MM7 605 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 AGAP4Q96P64 663 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 UTP23Q9BRU9 249 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 CCDC86Q9H6F5 360 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 ANKRD10Q9NXR5 420 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 GPR83Q9NYM4 423 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 TAS2R10Q9NYW0 307 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 MED11Q9P086 117 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 LRFN1Q9P244 771 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 KCNMB2Q9Y691 235 aa13.41□□□□□ -0.26
SHKBP1-211ENST00000595945 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PIP5K1CO60331 668 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 OR10H3O60404 316 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 SNX4O95219 450 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 SNAP29O95721 258 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 P04436 131 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PNMTP11086 282 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 GP1BBP13224 206 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ITPKBP27987 946 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 CASRP41180 1078 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 OMPP47874 163 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 GSSP48637 474 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 FOXD4Q12950 439 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 QPRTQ15274 297 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 INPP5JQ15735 1006 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 CMPK2Q5EBM0 449 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 SLC25A53Q5H9E4 307 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 OR5M10Q6IEU7 315 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 IGFL2Q6UWQ7 119 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ZNF730Q6ZMV8 503 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 LINC00696Q6ZRV3 163 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PLCZ1Q86YW0 608 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 SPACA3Q8IXA5 215 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ATG16L2Q8NAA4 619 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 AQP11Q8NBQ7 271 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PSD4Q8NDX1 1056 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 MDS2Q8NDY4 140 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ZNF563Q8TA94 476 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 TMEM239Q8WW34 195 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 ST8SIA1Q92185 356 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 NIPSNAP1Q9BPW8 284 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 DSN1Q9H410 356 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 TIMMDC1Q9NPL8 285 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 KIF17Q9P2E2 1029 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 POFUT2Q9Y2G5 429 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 C15orf41Q9Y2V0 281 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
SHKBP1-211ENST00000595945 DNAJC13O75165 2243 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 IGKV1D-42A0A075B6H8 117 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 A0A0G2JMM0 328 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 A0A1W2PPB8 328 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 A0A1W2PRS3 328 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 A6NL46 340 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 KIR3DP1A8MWS1 328 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 WISP1O95388 367 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PRKCAP17252 672 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 RAD23AP54725 363 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 CTBP2P56545 445 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 PRKCDQ05655 676 aa13.39□□□□□ -0.27
SHKBP1-211ENST00000595945 LSRQ86X29 649 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms